Difference between revisions of "TSS:Hg 154765.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |HJMD= | ||
| + | |PCAD= | ||
|all_trans=AB527800:12 EU832319:13 EU832404:13 KJ904433:13 X63629:-32 AK225396:-49 AK312554:-56 ENST00000542274.5:-58 uc059whp.1:-58 AK296968:-58 ENST00000566808.2:272 uc059whq.1:272 ENST00000429102.6:-366 uc059who.1:-366 BC014462:-366 | |all_trans=AB527800:12 EU832319:13 EU832404:13 KJ904433:13 X63629:-32 AK225396:-49 AK312554:-56 ENST00000542274.5:-58 uc059whp.1:-58 AK296968:-58 ENST00000566808.2:272 uc059whq.1:272 ENST00000429102.6:-366 uc059who.1:-366 BC014462:-366 | ||
|chr=chr16 | |chr=chr16 | ||
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|distance_to_tss=526 | |distance_to_tss=526 | ||
|end=68645365 | |end=68645365 | ||
| + | |end_of_center_position=68645362 | ||
|entrez_id=1001 | |entrez_id=1001 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
| − | |gene_alias=CDHP | + | |gene_alias=CDHP |
|gene_description=cadherin 3 | |gene_description=cadherin 3 | ||
|gene_id=1001 | |gene_id=1001 | ||
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|species=human | |species=human | ||
|start=68645358 | |start=68645358 | ||
| + | |start_of_center_position=68645361 | ||
|strand=+ | |strand=+ | ||
|transcript_name=AB527800 | |transcript_name=AB527800 | ||
Revision as of 20:34, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 68645361 |
|---|---|
| End of the center position in the TSS region: | 68645362 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | AB527800 |
|---|---|
| Distance: | 12 |
| Num_trans: | 15 |
| All_trans: | AB527800:12 EU832319:13 EU832404:13 KJ904433:13 X63629:-32 AK225396:-49 AK312554:-56 ENST00000542274.5:-58 uc059whp.1:-58 AK296968:-58 ENST00000566808.2:272 uc059whq.1:272 ENST00000429102.6:-366 uc059who.1:-366 BC014462:-366 |
TATA-Box annotation
| Distance to TSS: | 526 |
|---|---|
| Nearest PromoterID: | NM_001317196 |
| Entrez ID: | 1001 |
| Nearest Unigene: | Hs.191842 |
| Nearest Refseq: | NM_001793 |
| Nearest Ensembl: | ENSG00000062038 |
| Gene Name: | cadherin 3 |
| Gene Alias: | CDHP |
| Gene Description: | cadherin 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
