Difference between revisions of "TSS:Hg 154770.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000569080.1:0 uc059whu.1:0 ENST00000569117.1:311 uc059whv.1:311 |chr=chr16 |cpg_percent=0.04 |distance=0 |distance_to_tss=-41465 |end=68695833 |en...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |CD324= | ||
| + | |CDHE= | ||
| + | |ECAD= | ||
| + | |LCAM= | ||
| + | |UVO= | ||
|all_trans=ENST00000569080.1:0 uc059whu.1:0 ENST00000569117.1:311 uc059whv.1:311 | |all_trans=ENST00000569080.1:0 uc059whu.1:0 ENST00000569117.1:311 uc059whv.1:311 | ||
|chr=chr16 | |chr=chr16 | ||
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|distance_to_tss=-41465 | |distance_to_tss=-41465 | ||
|end=68695833 | |end=68695833 | ||
| + | |end_of_center_position=68695825 | ||
|entrez_id=999 | |entrez_id=999 | ||
|gc_percent=0.58209 | |gc_percent=0.58209 | ||
| − | |gene_alias=Arc-1 | + | |gene_alias=Arc-1 |
|gene_description=cadherin 1 | |gene_description=cadherin 1 | ||
|gene_id=1001 | |gene_id=1001 | ||
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|species=human | |species=human | ||
|start=68695816 | |start=68695816 | ||
| + | |start_of_center_position=68695824 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000569080.1 uc059whu.1 | |transcript_name=ENST00000569080.1 uc059whu.1 | ||
Revision as of 20:34, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 68695824 |
|---|---|
| End of the center position in the TSS region: | 68695825 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000569080.1 uc059whu.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENST00000569080.1:0 uc059whu.1:0 ENST00000569117.1:311 uc059whv.1:311 |
TATA-Box annotation
| Distance to TSS: | -41465 |
|---|---|
| Nearest PromoterID: | NM_001317186 |
| Entrez ID: | 999 |
| Nearest Unigene: | Hs.461086 |
| Nearest Refseq: | NM_004360 |
| Nearest Ensembl: | ENSG00000039068 |
| Gene Name: | cadherin 15; cadherin 3 |
| Gene Alias: | Arc-1 |
| Gene Description: | cadherin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.58209 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
