Difference between revisions of "TSS:Hg 121321.1"
From referenceTSS
| Line 2: | Line 2: | ||
|HYPP= | |HYPP= | ||
|MiRP2= | |MiRP2= | ||
| − | |all_trans=ENST00000531854.5:0 ENST00000529425.5:0 ENST00000526855.1:0 NM_005472 | + | |all_trans=ENST00000310128.9:0 ENST00000531854.5:0 ENST00000529425.5:0 ENST00000526855.1:0 NM_005472:0 CR936625:0 DQ192291:0 ENST00000532569.5:-173 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 11: | Line 11: | ||
|entrez_id=10008 | |entrez_id=10008 | ||
|gc_percent=0.756219 | |gc_percent=0.756219 | ||
| − | |gene_alias=HOKPP | + | |gene_alias=BRGDA6{{!}}HOKPP{{!}}HYPP{{!}}MiRP2 |
|gene_description=potassium voltage-gated channel subfamily E regulatory subunit 3 | |gene_description=potassium voltage-gated channel subfamily E regulatory subunit 3 | ||
|gene_id=10008 | |gene_id=10008 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_005472 | |nearest_refseq=NM_005472 | ||
|nearest_unigene=Hs.523899 | |nearest_unigene=Hs.523899 | ||
| − | |num_trans= | + | |num_trans=8 |
|species=human | |species=human | ||
|start=74467537 | |start=74467537 | ||
|start_of_center_position=74467546 | |start_of_center_position=74467546 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000531854.5 ENST00000529425.5 ENST00000526855.1 NM_005472 | + | |transcript_name=ENST00000310128.9 ENST00000531854.5 ENST00000529425.5 ENST00000526855.1 NM_005472 CR936625 DQ192291 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_121321.1 | |tss_id=hg_121321.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=E9PJQ7 E9PJV9 E9PN03 Q9Y6H6 | + | |uniprot_id=E9PJQ7 E9PJV9 E9PN03 Q6IAE6 Q9Y6H6 |
}} | }} | ||
Revision as of 00:22, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 74467546 |
|---|---|
| End of the center position in the TSS region: | 74467547 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000310128.9 ENST00000531854.5 ENST00000529425.5 ENST00000526855.1 NM_005472 CR936625 DQ192291 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENST00000310128.9:0 ENST00000531854.5:0 ENST00000529425.5:0 ENST00000526855.1:0 NM_005472:0 CR936625:0 DQ192291:0 ENST00000532569.5:-173 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_005472 |
| Entrez ID: | 10008 |
| Nearest Unigene: | Hs.523899 |
| Nearest Refseq: | NM_005472 |
| Nearest Ensembl: | ENSG00000175538 |
| Gene Name: | potassium voltage-gated channel subfamily E regulatory subunit 3 |
| Gene Alias: | BRGDA6|HOKPP|HYPP|MiRP2 |
| Gene Description: | potassium voltage-gated channel subfamily E regulatory subunit 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.756219 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
