Difference between revisions of "TSS:Hg 116167.1"
From referenceTSS
| Line 3: | Line 3: | ||
|NAADALASE2= | |NAADALASE2= | ||
|NAALADASE2= | |NAALADASE2= | ||
| − | |all_trans= | + | |all_trans=ENST00000527493.5:88 ENST00000534061.6:136 NM_001300930:136 NM_005467:136 ENST00000529090.5:137 BC038840:137 AK075390:148 ENST00000524501.1:168 BC027594:168 ENST00000321955.8:185 BC088727:185 AJ012370:187 ENST00000525171.5:202 BC067793:202 ENST00000375944.7:211 BC099646:211 BC096316:211 BC096317:211 BC096318:211 KJ902050:226 CU691606:231 |
|chr=chr11 | |chr=chr11 | ||
|cpg_percent=0.035 | |cpg_percent=0.035 | ||
| − | |distance= | + | |distance=88 |
| − | |distance_to_tss=- | + | |distance_to_tss=-143 |
|end=90134527 | |end=90134527 | ||
|end_of_center_position=90134521 | |end_of_center_position=90134521 | ||
|entrez_id=10003 | |entrez_id=10003 | ||
|gc_percent=0.572139 | |gc_percent=0.572139 | ||
| − | |gene_alias=GCPIII | + | |gene_alias=GCPIII{{!}}GPCIII{{!}}NAADALASE2{{!}}NAALADASE2 |
|gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | |gene_description=N-acetylated alpha-linked acidic dipeptidase 2 | ||
|gene_id=10003 | |gene_id=10003 | ||
| Line 18: | Line 18: | ||
|gene_source=HGNC:14526 | |gene_source=HGNC:14526 | ||
|gene_symbol=NAALAD2 | |gene_symbol=NAALAD2 | ||
| − | |gene_synonyms= | + | |gene_synonyms=GCPIII NAALADASE2 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:14526 | |hgnc_mgi_id=HGNC:14526 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_005467 | |nearest_refseq=NM_005467 | ||
|nearest_unigene=Hs.112482 | |nearest_unigene=Hs.112482 | ||
| − | |num_trans= | + | |num_trans=21 |
|species=human | |species=human | ||
|start=90134513 | |start=90134513 | ||
|start_of_center_position=90134520 | |start_of_center_position=90134520 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000527493.5 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_116167.1 | |tss_id=hg_116167.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=E9PJV2 |
}} | }} | ||
Revision as of 22:22, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 90134520 |
|---|---|
| End of the center position in the TSS region: | 90134521 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000527493.5 |
|---|---|
| Distance: | 88 |
| Num_trans: | 21 |
| All_trans: | ENST00000527493.5:88 ENST00000534061.6:136 NM_001300930:136 NM_005467:136 ENST00000529090.5:137 BC038840:137 AK075390:148 ENST00000524501.1:168 BC027594:168 ENST00000321955.8:185 BC088727:185 AJ012370:187 ENST00000525171.5:202 BC067793:202 ENST00000375944.7:211 BC099646:211 BC096316:211 BC096317:211 BC096318:211 KJ902050:226 CU691606:231 |
TATA-Box annotation
| Distance to TSS: | -143 |
|---|---|
| Nearest PromoterID: | NM_001300930 |
| Entrez ID: | 10003 |
| Nearest Unigene: | Hs.112482 |
| Nearest Refseq: | NM_005467 |
| Nearest Ensembl: | ENSG00000077616 |
| Gene Name: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Alias: | GCPIII|GPCIII|NAADALASE2|NAALADASE2 |
| Gene Description: | N-acetylated alpha-linked acidic dipeptidase 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.572139 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
