Difference between revisions of "TSS:Mm 115916.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000148743.1:0 AK006302:0 | + | |all_trans=ENSMUST00000148743.1:0 NR_167692:0 NR_167693:0 AK006302:0 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
|gene_alias=1700024H08Rik | |gene_alias=1700024H08Rik | ||
| − | |gene_description= | + | |gene_description=histone cluster 1, H4h |
|gene_id=100034675 | |gene_id=100034675 | ||
|gene_name=predicted gene 11335 | |gene_name=predicted gene 11335 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_153173 | |nearest_refseq=NM_153173 | ||
|nearest_unigene=Mm.158272 | |nearest_unigene=Mm.158272 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=mouse | |species=mouse | ||
|start=23530917 | |start=23530917 | ||
|start_of_center_position=23530930 | |start_of_center_position=23530930 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENSMUST00000148743.1 AK006302 | + | |transcript_name=ENSMUST00000148743.1 NR_167692 NR_167693 AK006302 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=mm_115916.1 | |tss_id=mm_115916.1 | ||
Revision as of 22:19, 19 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 23530930 |
|---|---|
| End of the center position in the TSS region: | 23530931 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENSMUST00000148743.1 NR_167692 NR_167693 AK006302 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000148743.1:0 NR_167692:0 NR_167693:0 AK006302:0 |
TATA-Box annotation
| Distance to TSS: | -114 |
|---|---|
| Nearest PromoterID: | NM_153173 |
| Entrez ID: | 69386 |
| Nearest Unigene: | Mm.158272 |
| Nearest Refseq: | NM_153173 |
| Nearest Ensembl: | ENSMUSG00000060981 |
| Gene Name: | predicted gene 11335 |
| Gene Alias: | 1700024H08Rik |
| Gene Description: | histone cluster 1, H4h |
| Gene Type: | protein-coding |
| CpG%: | 0.04 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
