Difference between revisions of "TSS:Hg 100562.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.075 |distance_to_tss=317 |entrez_id=2189 |gc_percent=0.686567 |gene_alias=FAG|XRCC9 |gene_description=Fanconi anemia complementation group G |gene_n...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |XRCC9= | ||
| + | |all_trans=ENST00000425676.5:0 uc064svu.1:0 AK311348:0 ENST00000462124.1:15 uc064swa.1:15 BC000032:22 U70310:26 BC011623:-75 DQ892166:155 DQ895360:155 AB464437:158 KJ891145:159 KR709811:159 KR709812:159 KR709813:159 CU674000:159 BT009813:160 KU178053:160 KU178054:160 KU178055:160 KU178056:160 KU178057:160 AK293427:-187 AK312987:-227 ENST00000448890.1:-228 uc064svy.1:-228 ENST00000378643.7:-302 NM_004629:-302 uc003zwb.1:-302 AJ007669:-302 KU159422:-333 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| + | |distance=0 | ||
|distance_to_tss=317 | |distance_to_tss=317 | ||
| + | |end=35079714 | ||
|entrez_id=2189 | |entrez_id=2189 | ||
|gc_percent=0.686567 | |gc_percent=0.686567 | ||
|gene_alias=FAG|XRCC9 | |gene_alias=FAG|XRCC9 | ||
|gene_description=Fanconi anemia complementation group G | |gene_description=Fanconi anemia complementation group G | ||
| − | |gene_name=FANCG | + | |gene_id=2189 |
| + | |gene_name=Fanconi anemia complementation group G | ||
| + | |gene_source=HGNC:3588 | ||
| + | |gene_symbol=FANCG | ||
| + | |gene_synonyms=FAG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3588 | ||
|nearest_ensembl=ENSG00000221829 | |nearest_ensembl=ENSG00000221829 | ||
|nearest_promoter_id=NM_004629 | |nearest_promoter_id=NM_004629 | ||
|nearest_refseq=NM_004629 | |nearest_refseq=NM_004629 | ||
|nearest_unigene=Hs.591084 | |nearest_unigene=Hs.591084 | ||
| + | |num_trans=31 | ||
| + | |species=human | ||
| + | |start=35079683 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000425676.5 uc064svu.1 AK311348 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100562.1 | |tss_id=hg_100562.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=F8WC08 | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
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|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000425676.5 uc064svu.1 AK311348 |
|---|---|
| Distance: | 0 |
| Num_trans: | 31 |
| All_trans: | ENST00000425676.5:0 uc064svu.1:0 AK311348:0 ENST00000462124.1:15 uc064swa.1:15 BC000032:22 U70310:26 BC011623:-75 DQ892166:155 DQ895360:155 AB464437:158 KJ891145:159 KR709811:159 KR709812:159 KR709813:159 CU674000:159 BT009813:160 KU178053:160 KU178054:160 KU178055:160 KU178056:160 KU178057:160 AK293427:-187 AK312987:-227 ENST00000448890.1:-228 uc064svy.1:-228 ENST00000378643.7:-302 NM_004629:-302 uc003zwb.1:-302 AJ007669:-302 KU159422:-333 |
TATA-Box annotation
| Distance to TSS: | 317 |
|---|---|
| Nearest PromoterID: | NM_004629 |
| Entrez ID: | 2189 |
| Nearest Unigene: | Hs.591084 |
| Nearest Refseq: | NM_004629 |
| Nearest Ensembl: | ENSG00000221829 |
| Gene Name: | Fanconi anemia complementation group G |
| Gene Alias: | FAG |
| Gene Description: | Fanconi anemia complementation group G |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.686567 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
