Difference between revisions of "TSS:Hg 100564.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=84 |entrez_id=2189 |gc_percent=0.711443 |gene_alias=FAG|XRCC9 |gene_description=Fanconi anemia complementation group G |gene_name...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |XRCC9= | ||
| + | |all_trans=ENST00000448890.1:0 uc064svy.1:0 AK312987:0 AK293427:14 ENST00000378643.7:-67 NM_004629:-67 uc003zwb.1:-67 AJ007669:-67 KU159422:-98 BC011623:126 ENST00000425676.5:222 uc064svu.1:222 AK311348:222 ENST00000462124.1:246 uc064swa.1:246 BC000032:253 U70310:257 DQ892166:386 DQ895360:386 AB464437:389 KJ891145:390 KR709811:390 KR709812:390 KR709813:390 CU674000:390 BT009813:391 KU178053:391 KU178054:391 KU178055:391 KU178056:391 KU178057:391 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=84 | |distance_to_tss=84 | ||
| + | |end=35079949 | ||
|entrez_id=2189 | |entrez_id=2189 | ||
|gc_percent=0.711443 | |gc_percent=0.711443 | ||
|gene_alias=FAG|XRCC9 | |gene_alias=FAG|XRCC9 | ||
|gene_description=Fanconi anemia complementation group G | |gene_description=Fanconi anemia complementation group G | ||
| − | |gene_name=FANCG | + | |gene_id=2189 |
| + | |gene_name=Fanconi anemia complementation group G | ||
| + | |gene_source=HGNC:3588 | ||
| + | |gene_symbol=FANCG | ||
| + | |gene_synonyms=FAG | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:3588 | ||
|nearest_ensembl=ENSG00000221829 | |nearest_ensembl=ENSG00000221829 | ||
|nearest_promoter_id=NM_004629 | |nearest_promoter_id=NM_004629 | ||
|nearest_refseq=NM_004629 | |nearest_refseq=NM_004629 | ||
|nearest_unigene=Hs.591084 | |nearest_unigene=Hs.591084 | ||
| + | |num_trans=31 | ||
| + | |species=human | ||
| + | |start=35079914 | ||
| + | |strand=- | ||
| + | |transcript_name=ENST00000448890.1 uc064svy.1 AK312987 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100564.1 | |tss_id=hg_100564.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=C9JSE3 | ||
}} | }} | ||
Revision as of 17:11, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000448890.1 uc064svy.1 AK312987 |
|---|---|
| Distance: | 0 |
| Num_trans: | 31 |
| All_trans: | ENST00000448890.1:0 uc064svy.1:0 AK312987:0 AK293427:14 ENST00000378643.7:-67 NM_004629:-67 uc003zwb.1:-67 AJ007669:-67 KU159422:-98 BC011623:126 ENST00000425676.5:222 uc064svu.1:222 AK311348:222 ENST00000462124.1:246 uc064swa.1:246 BC000032:253 U70310:257 DQ892166:386 DQ895360:386 AB464437:389 KJ891145:390 KR709811:390 KR709812:390 KR709813:390 CU674000:390 BT009813:391 KU178053:391 KU178054:391 KU178055:391 KU178056:391 KU178057:391 |
TATA-Box annotation
| Distance to TSS: | 84 |
|---|---|
| Nearest PromoterID: | NM_004629 |
| Entrez ID: | 2189 |
| Nearest Unigene: | Hs.591084 |
| Nearest Refseq: | NM_004629 |
| Nearest Ensembl: | ENSG00000221829 |
| Gene Name: | Fanconi anemia complementation group G |
| Gene Alias: | FAG |
| Gene Description: | Fanconi anemia complementation group G |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.711443 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
