Difference between revisions of "TSS:Hg 35988.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RCS= | |RCS= | ||
|TARPP= | |TARPP= | ||
| − | |all_trans=AK057559:48 ENST00000428373.5:-57 | + | |all_trans=AK057559:48 ENST00000428373.5:-57 BC041385:-57 NM_001267616:-121 NM_001267619:-121 NM_001385491:-121 NM_001385492:-121 NM_001385495:-121 NM_001385496:-121 NM_001385497:-121 NM_001385517:-121 NM_001385536:-121 NM_001385555:-121 NM_001385556:-121 NM_001385558:-121 NM_001385561:-121 NM_001385562:-121 NM_001385563:-121 NM_001385564:-121 NR_169632:-121 NR_169633:-121 NR_169635:-121 NR_169644:-121 NR_169645:-121 NR_169647:-121 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=48 | |distance=48 | ||
| − | |distance_to_tss= | + | |distance_to_tss=126 |
|end=35639656 | |end=35639656 | ||
|end_of_center_position=35639651 | |end_of_center_position=35639651 | ||
|entrez_id=10777 | |entrez_id=10777 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=ARPP-21 | + | |gene_alias=ARPP-21{{!}}R3HDM3{{!}}RCS{{!}}TARPP |
|gene_description=cAMP regulated phosphoprotein 21 | |gene_description=cAMP regulated phosphoprotein 21 | ||
|gene_id=100130503 | |gene_id=100130503 | ||
| − | |gene_name= | + | |gene_name=ARPP21 |
|gene_source=EntrezGene:100130503 | |gene_source=EntrezGene:100130503 | ||
|gene_symbol=LOC100130503 | |gene_symbol=LOC100130503 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_016300 | |nearest_refseq=NM_016300 | ||
|nearest_unigene=Hs.475902 | |nearest_unigene=Hs.475902 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=35639645 | |start=35639645 | ||
Latest revision as of 21:27, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35639650 |
|---|---|
| End of the center position in the TSS region: | 35639651 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK057559 |
|---|---|
| Distance: | 48 |
| Num_trans: | 25 |
| All_trans: | AK057559:48 ENST00000428373.5:-57 BC041385:-57 NM_001267616:-121 NM_001267619:-121 NM_001385491:-121 NM_001385492:-121 NM_001385495:-121 NM_001385496:-121 NM_001385497:-121 NM_001385517:-121 NM_001385536:-121 NM_001385555:-121 NM_001385556:-121 NM_001385558:-121 NM_001385561:-121 NM_001385562:-121 NM_001385563:-121 NM_001385564:-121 NR_169632:-121 NR_169633:-121 NR_169635:-121 NR_169644:-121 NR_169645:-121 NR_169647:-121 |
TATA-Box annotation
| Distance to TSS: | 126 |
|---|---|
| Nearest PromoterID: | NM_001267616 |
| Entrez ID: | 10777 |
| Nearest Unigene: | Hs.475902 |
| Nearest Refseq: | NM_016300 |
| Nearest Ensembl: | ENSG00000172995 |
| Gene Name: | ARPP21 |
| Gene Alias: | ARPP-21|R3HDM3|RCS|TARPP |
| Gene Description: | cAMP regulated phosphoprotein 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
