Difference between revisions of "TSS:Hg 35991.1"
From referenceTSS
| Line 3: | Line 3: | ||
|RCS= | |RCS= | ||
|TARPP= | |TARPP= | ||
| − | |all_trans=AK057559:0 ENST00000428373.5:-112 | + | |all_trans=AK057559:0 ENST00000428373.5:-112 BC041385:-112 NM_001267616:-176 NM_001267619:-176 NM_001385491:-176 NM_001385492:-176 NM_001385495:-176 NM_001385496:-176 NM_001385497:-176 NM_001385517:-176 NM_001385536:-176 NM_001385555:-176 NM_001385556:-176 NM_001385558:-176 NM_001385561:-176 NM_001385562:-176 NM_001385563:-176 NM_001385564:-176 NR_169632:-176 NR_169633:-176 NR_169635:-176 NR_169644:-176 NR_169645:-176 NR_169647:-176 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=181 |
|end=35639711 | |end=35639711 | ||
|end_of_center_position=35639706 | |end_of_center_position=35639706 | ||
|entrez_id=10777 | |entrez_id=10777 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=ARPP-21 | + | |gene_alias=ARPP-21{{!}}R3HDM3{{!}}RCS{{!}}TARPP |
|gene_description=cAMP regulated phosphoprotein 21 | |gene_description=cAMP regulated phosphoprotein 21 | ||
|gene_id=100130503 | |gene_id=100130503 | ||
| − | |gene_name= | + | |gene_name=ARPP21 |
|gene_source=EntrezGene:100130503 | |gene_source=EntrezGene:100130503 | ||
|gene_symbol=LOC100130503 | |gene_symbol=LOC100130503 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_016300 | |nearest_refseq=NM_016300 | ||
|nearest_unigene=Hs.475902 | |nearest_unigene=Hs.475902 | ||
| − | |num_trans= | + | |num_trans=25 |
|species=human | |species=human | ||
|start=35639700 | |start=35639700 | ||
Latest revision as of 21:27, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35639705 |
|---|---|
| End of the center position in the TSS region: | 35639706 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK057559 |
|---|---|
| Distance: | 0 |
| Num_trans: | 25 |
| All_trans: | AK057559:0 ENST00000428373.5:-112 BC041385:-112 NM_001267616:-176 NM_001267619:-176 NM_001385491:-176 NM_001385492:-176 NM_001385495:-176 NM_001385496:-176 NM_001385497:-176 NM_001385517:-176 NM_001385536:-176 NM_001385555:-176 NM_001385556:-176 NM_001385558:-176 NM_001385561:-176 NM_001385562:-176 NM_001385563:-176 NM_001385564:-176 NR_169632:-176 NR_169633:-176 NR_169635:-176 NR_169644:-176 NR_169645:-176 NR_169647:-176 |
TATA-Box annotation
| Distance to TSS: | 181 |
|---|---|
| Nearest PromoterID: | NM_001267616 |
| Entrez ID: | 10777 |
| Nearest Unigene: | Hs.475902 |
| Nearest Refseq: | NM_016300 |
| Nearest Ensembl: | ENSG00000172995 |
| Gene Name: | ARPP21 |
| Gene Alias: | ARPP-21|R3HDM3|RCS|TARPP |
| Gene Description: | cAMP regulated phosphoprotein 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
