Difference between revisions of "TSS:Hg 42213.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans= | + | |all_trans=LF378584:0 MA614161:0 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0 | |cpg_percent=0 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-1764 | |distance_to_tss=-1764 | ||
|end=49101686 | |end=49101686 | ||
| Line 12: | Line 12: | ||
|gene_description=microRNA 6890 | |gene_description=microRNA 6890 | ||
|gene_id=5859 | |gene_id=5859 | ||
| − | |gene_name= | + | |gene_name=MIR6890 |
|gene_source=HGNC:9751 | |gene_source=HGNC:9751 | ||
|gene_symbol=QARS | |gene_symbol=QARS | ||
| Line 18: | Line 18: | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
|hgnc_mgi_id=HGNC:9751 | |hgnc_mgi_id=HGNC:9751 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000284488 |
|nearest_promoter_id=NR_106950 | |nearest_promoter_id=NR_106950 | ||
|nearest_refseq=NR_106950 | |nearest_refseq=NR_106950 | ||
|nearest_unigene= | |nearest_unigene= | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=49101669 | |start=49101669 | ||
|start_of_center_position=49101677 | |start_of_center_position=49101677 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=LF378584 MA614161 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_42213.1 | |tss_id=hg_42213.1 | ||
Latest revision as of 23:51, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 49101677 |
|---|---|
| End of the center position in the TSS region: | 49101678 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | LF378584 MA614161 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | LF378584:0 MA614161:0 |
TATA-Box annotation
| Distance to TSS: | -1764 |
|---|---|
| Nearest PromoterID: | NR_106950 |
| Entrez ID: | 102465536 |
| Nearest Unigene: | |
| Nearest Refseq: | NR_106950 |
| Nearest Ensembl: | ENSG00000284488 |
| Gene Name: | MIR6890 |
| Gene Alias: | hsa-mir-6890 |
| Gene Description: | microRNA 6890 |
| Gene Type: | ncRNA |
| CpG%: | 0 |
| GC%: | 0.547264 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
