Difference between revisions of "TSS:Hg 42214.1"
From referenceTSS
| Line 2: | Line 2: | ||
|MSCCA= | |MSCCA= | ||
|PRO2195= | |PRO2195= | ||
| − | |all_trans=ENST00000634425.1:0 ENST00000635292.1:-10 BC016634:26 ENST00000635541 | + | |all_trans=ENST00000634425.1:0 ENST00000635292.1:-10 ENST00000636669.1:22 ENST00000636018.1:22 BC016634:26 ENST00000635541.1:-59 AK293260:-59 ENST00000464962.6:-80 ENST00000635375.1:-80 JF432294:-281 AB385024:-281 CU674766:-281 BC001567:-284 BC000394:-286 X76013:-286 BC029739:-287 ENST00000470619.6:-300 ENST00000635194.1:-300 AK297987:-301 AK300220:-301 ENST00000306125.12:-305 ENST00000430182.5:-305 ENST00000634802.1:-305 ENST00000634602.1:-305 ENST00000635052.1:-305 ENST00000418549.3:-305 ENST00000634724.1:-305 ENST00000635278.1:-305 NM_005051:-305 NR_073590:-305 NM_001272073:-305 AK056815:-305 AK290523:-305 AK222510:-305 ENST00000414533.5:-306 ENST00000494767.2:-306 ENST00000634609.1:-306 AK301559:-306 ENST00000417025.2:-307 ENST00000635494.1:-307 ENST00000482438.2:-307 ENST00000635443.1:-308 ENST00000452739.5:-308 ENST00000634953.1:-308 ENST00000635231.1:-311 ENST00000482261.7:-357 JN104585:-409 LF378582:486 MA614159:486 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=310 |
|end=49104452 | |end=49104452 | ||
|end_of_center_position=49104447 | |end_of_center_position=49104447 | ||
|entrez_id=5859 | |entrez_id=5859 | ||
|gc_percent=0.577114 | |gc_percent=0.577114 | ||
| − | |gene_alias=GLNRS | + | |gene_alias=GLNRS{{!}}MSCCA{{!}}PRO2195 |
|gene_description=glutaminyl-tRNA synthetase | |gene_description=glutaminyl-tRNA synthetase | ||
|gene_id=5859 | |gene_id=5859 | ||
| − | |gene_name=glutaminyl-tRNA synthetase | + | |gene_name=glutaminyl-tRNA synthetase 1 |
|gene_source=HGNC:9751 | |gene_source=HGNC:9751 | ||
| − | |gene_symbol= | + | |gene_symbol=QARS1 |
|gene_synonyms= | |gene_synonyms= | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:9751 | |hgnc_mgi_id=HGNC:9751 | ||
|nearest_ensembl=ENSG00000172053 | |nearest_ensembl=ENSG00000172053 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_073590 |
|nearest_refseq=NM_005051 | |nearest_refseq=NM_005051 | ||
|nearest_unigene=Hs.79322 | |nearest_unigene=Hs.79322 | ||
Revision as of 23:51, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 49104446 |
|---|---|
| End of the center position in the TSS region: | 49104447 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000634425.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 49 |
| All_trans: | ENST00000634425.1:0 ENST00000635292.1:-10 ENST00000636669.1:22 ENST00000636018.1:22 BC016634:26 ENST00000635541.1:-59 AK293260:-59 ENST00000464962.6:-80 ENST00000635375.1:-80 JF432294:-281 AB385024:-281 CU674766:-281 BC001567:-284 BC000394:-286 X76013:-286 BC029739:-287 ENST00000470619.6:-300 ENST00000635194.1:-300 AK297987:-301 AK300220:-301 ENST00000306125.12:-305 ENST00000430182.5:-305 ENST00000634802.1:-305 ENST00000634602.1:-305 ENST00000635052.1:-305 ENST00000418549.3:-305 ENST00000634724.1:-305 ENST00000635278.1:-305 NM_005051:-305 NR_073590:-305 NM_001272073:-305 AK056815:-305 AK290523:-305 AK222510:-305 ENST00000414533.5:-306 ENST00000494767.2:-306 ENST00000634609.1:-306 AK301559:-306 ENST00000417025.2:-307 ENST00000635494.1:-307 ENST00000482438.2:-307 ENST00000635443.1:-308 ENST00000452739.5:-308 ENST00000634953.1:-308 ENST00000635231.1:-311 ENST00000482261.7:-357 JN104585:-409 LF378582:486 MA614159:486 |
TATA-Box annotation
| Distance to TSS: | 310 |
|---|---|
| Nearest PromoterID: | NR_073590 |
| Entrez ID: | 5859 |
| Nearest Unigene: | Hs.79322 |
| Nearest Refseq: | NM_005051 |
| Nearest Ensembl: | ENSG00000172053 |
| Gene Name: | glutaminyl-tRNA synthetase 1 |
| Gene Alias: | GLNRS|MSCCA|PRO2195 |
| Gene Description: | glutaminyl-tRNA synthetase |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.577114 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
