Difference between revisions of "TSS:Hg 10057.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.05 |distance_to_tss=-174 |entrez_id=79707 |gc_percent=0.472637 |gene_alias=Grc3|NET6 |gene_description=nucleolar protein 9 |gene_name=NOL9 |gene_typ...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |NET6= | ||
| + | |all_trans=NM_024654:164 BC105095:164 BC112278:164 BC143646:164 ENST00000377705.5:227 uc001ans.4:227 AK091284:227 AK289653:232 BC110849:255 HQ258631:259 KJ899555:259 KJ901072:259 ENST00000464665.1:262 uc057bvl.1:262 | ||
| + | |chr=chr1 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
| + | |distance=164 | ||
|distance_to_tss=-174 | |distance_to_tss=-174 | ||
| + | |end=6554782 | ||
|entrez_id=79707 | |entrez_id=79707 | ||
|gc_percent=0.472637 | |gc_percent=0.472637 | ||
|gene_alias=Grc3|NET6 | |gene_alias=Grc3|NET6 | ||
|gene_description=nucleolar protein 9 | |gene_description=nucleolar protein 9 | ||
| − | |gene_name=NOL9 | + | |gene_id=79707 |
| + | |gene_name=nucleolar protein 9 | ||
| + | |gene_source=HGNC:26265 | ||
| + | |gene_symbol=NOL9 | ||
| + | |gene_synonyms=FLJ23323 Grc3 NET6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:26265 | ||
|nearest_ensembl=ENSG00000162408 | |nearest_ensembl=ENSG00000162408 | ||
|nearest_promoter_id=NM_024654 | |nearest_promoter_id=NM_024654 | ||
|nearest_refseq=NM_024654 | |nearest_refseq=NM_024654 | ||
|nearest_unigene=Hs.59425 | |nearest_unigene=Hs.59425 | ||
| + | |num_trans=14 | ||
| + | |species=human | ||
| + | |start=6554761 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_024654 BC105095 BC112278 BC143646 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_10057.1 | |tss_id=hg_10057.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q5SY16 | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_024654 BC105095 BC112278 BC143646 |
|---|---|
| Distance: | 164 |
| Num_trans: | 14 |
| All_trans: | NM_024654:164 BC105095:164 BC112278:164 BC143646:164 ENST00000377705.5:227 uc001ans.4:227 AK091284:227 AK289653:232 BC110849:255 HQ258631:259 KJ899555:259 KJ901072:259 ENST00000464665.1:262 uc057bvl.1:262 |
TATA-Box annotation
| Distance to TSS: | -174 |
|---|---|
| Nearest PromoterID: | NM_024654 |
| Entrez ID: | 79707 |
| Nearest Unigene: | Hs.59425 |
| Nearest Refseq: | NM_024654 |
| Nearest Ensembl: | ENSG00000162408 |
| Gene Name: | nucleolar protein 9 |
| Gene Alias: | Grc3 |
| Gene Description: | nucleolar protein 9 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.472637 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
