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Difference between revisions of "TSS:Hg 100578.1"

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(Created page with "{{TSSDetail |cpg_percent=0.06 |distance_to_tss=44 |entrez_id=80256 |gc_percent=0.656716 |gene_alias=KIAA1539 |gene_description=family with sequence similarity 214 member B |ge...")
 
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{{TSSDetail
 
{{TSSDetail
 +
|all_trans=ENST00000378566.5:0 ENST00000605104.1:0 ENST00000605392.1:0 uc003zwn.4:0 uc064swl.1:0 uc064swm.1:0 AK022837:0 AK021622:0 ENST00000322813.9:-2 uc003zwo.3:-2 BC004406:-2 AK307682:-14 NM_025182:-17 NR_134455:-78 ENST00000605244.5:-447 uc064swj.1:-447
 +
|chr=chr9
 
|cpg_percent=0.06
 
|cpg_percent=0.06
 +
|distance=0
 
|distance_to_tss=44
 
|distance_to_tss=44
 +
|end=35115894
 
|entrez_id=80256
 
|entrez_id=80256
 
|gc_percent=0.656716
 
|gc_percent=0.656716
 
|gene_alias=KIAA1539
 
|gene_alias=KIAA1539
 
|gene_description=family with sequence similarity 214 member B
 
|gene_description=family with sequence similarity 214 member B
|gene_name=FAM214B
+
|gene_id=80256
 +
|gene_name=family with sequence similarity 214 member B
 +
|gene_source=HGNC:25666
 +
|gene_symbol=FAM214B
 +
|gene_synonyms=FLJ11560 bA182N22.6
 
|gene_type=protein-coding
 
|gene_type=protein-coding
 +
|hgnc_mgi_id=HGNC:25666
 
|nearest_ensembl=ENSG00000005238
 
|nearest_ensembl=ENSG00000005238
 
|nearest_promoter_id=NM_025182
 
|nearest_promoter_id=NM_025182
 
|nearest_refseq=NM_025182
 
|nearest_refseq=NM_025182
 
|nearest_unigene=Hs.301696
 
|nearest_unigene=Hs.301696
 +
|num_trans=16
 +
|species=human
 +
|start=35115839
 +
|strand=-
 +
|transcript_name=ENST00000378566.5 ENST00000605104.1 ENST00000605392.1 uc003zwn.4 uc064swl.1 uc064swm.1 AK022837 AK021622
 +
|tss_classification=yes
 
|tss_id=hg_100578.1
 
|tss_id=hg_100578.1
 +
|tss_score=1
 +
|uniprot_id=Q7L5A3
 
}}
 
}}

Revision as of 17:12, 8 March 2018

Basic information about the TSS


TSS ID:hg_100578.1
Species:human
Chr:chr9
TSS Classification:yes
Start:35115839
End:35115894
Strand:-
TSS Score:1
Start of the center position in the TSS region:
End of the center position in the TSS region:



Gene and protein annotation


Transcript_name:ENST00000378566.5 ENST00000605104.1 ENST00000605392.1 uc003zwn.4 uc064swl.1 uc064swm.1 AK022837 AK021622
Distance:0
GeneID:80256
HGNC/MGI_ID:HGNC:25666
UniProt_ID:Q7L5A3
Gene_name:family with sequence similarity 214 member B
Gene_symbol:FAM214B
Gene_synonyms:FLJ11560 bA182N22.6
Gene_source:HGNC:25666



Transcript annotation


Transcript_name:ENST00000378566.5 ENST00000605104.1 ENST00000605392.1 uc003zwn.4 uc064swl.1 uc064swm.1 AK022837 AK021622
Distance:0
Num_trans:16
All_trans:ENST00000378566.5:0 ENST00000605104.1:0 ENST00000605392.1:0 uc003zwn.4:0 uc064swl.1:0 uc064swm.1:0 AK022837:0 AK021622:0 ENST00000322813.9:-2 uc003zwo.3:-2 BC004406:-2 AK307682:-14 NM_025182:-17 NR_134455:-78 ENST00000605244.5:-447 uc064swj.1:-447



TATA-Box annotation


Distance to TSS:44
Nearest PromoterID:NM_025182
Entrez ID:80256
Nearest Unigene:Hs.301696
Nearest Refseq:NM_025182
Nearest Ensembl:ENSG00000005238
Gene Name:family with sequence similarity 214 member B
Gene Alias:KIAA1539
Gene Description:family with sequence similarity 214 member B
Gene Type:protein-coding
CpG%:0.06
GC%:0.656716
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):