Difference between revisions of "TSS:Hg 100579.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.055 |distance_to_tss=0 |entrez_id=80256 |gc_percent=0.621891 |gene_alias=KIAA1539 |gene_description=family with sequence similarity 214 member B |ge...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=NM_025182:0 AK307682:0 ENST00000322813.9:10 uc003zwo.3:10 BC004406:10 AK021622:28 ENST00000605104.1:44 ENST00000605392.1:44 uc064swl.1:44 uc064swm.1:44 ENST00000378566.5:56 NR_134455:-56 uc003zwn.4:56 AK022837:56 ENST00000605244.5:-425 uc064swj.1:-425 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
| + | |distance=0 | ||
|distance_to_tss=0 | |distance_to_tss=0 | ||
| + | |end=35115916 | ||
|entrez_id=80256 | |entrez_id=80256 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
|gene_alias=KIAA1539 | |gene_alias=KIAA1539 | ||
|gene_description=family with sequence similarity 214 member B | |gene_description=family with sequence similarity 214 member B | ||
| − | |gene_name=FAM214B | + | |gene_id=80256 |
| + | |gene_name=family with sequence similarity 214 member B | ||
| + | |gene_source=HGNC:25666 | ||
| + | |gene_symbol=FAM214B | ||
| + | |gene_synonyms=FLJ11560 bA182N22.6 | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:25666 | ||
|nearest_ensembl=ENSG00000005238 | |nearest_ensembl=ENSG00000005238 | ||
|nearest_promoter_id=NM_025182 | |nearest_promoter_id=NM_025182 | ||
|nearest_refseq=NM_025182 | |nearest_refseq=NM_025182 | ||
|nearest_unigene=Hs.301696 | |nearest_unigene=Hs.301696 | ||
| + | |num_trans=16 | ||
| + | |species=human | ||
| + | |start=35115905 | ||
| + | |strand=- | ||
| + | |transcript_name=NM_025182 AK307682 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100579.1 | |tss_id=hg_100579.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id=Q7L5A3 | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | NM_025182 AK307682 |
|---|---|
| Distance: | 0 |
| Num_trans: | 16 |
| All_trans: | NM_025182:0 AK307682:0 ENST00000322813.9:10 uc003zwo.3:10 BC004406:10 AK021622:28 ENST00000605104.1:44 ENST00000605392.1:44 uc064swl.1:44 uc064swm.1:44 ENST00000378566.5:56 NR_134455:-56 uc003zwn.4:56 AK022837:56 ENST00000605244.5:-425 uc064swj.1:-425 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_025182 |
| Entrez ID: | 80256 |
| Nearest Unigene: | Hs.301696 |
| Nearest Refseq: | NM_025182 |
| Nearest Ensembl: | ENSG00000005238 |
| Gene Name: | family with sequence similarity 214 member B |
| Gene Alias: | KIAA1539 |
| Gene Description: | family with sequence similarity 214 member B |
| Gene Type: | protein-coding |
| CpG%: | 0.055 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
