Difference between revisions of "TSS:Hg 100581.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.015 |distance_to_tss=1793 |entrez_id=9853 |gc_percent=0.487562 |gene_alias=Iporin |gene_description=RUN and SH3 domain containing 2 |gene_name=RUSC2...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
| + | |distance= | ||
|distance_to_tss=1793 | |distance_to_tss=1793 | ||
| + | |end=35491627 | ||
|entrez_id=9853 | |entrez_id=9853 | ||
|gc_percent=0.487562 | |gc_percent=0.487562 | ||
| Line 12: | Line 15: | ||
|nearest_refseq=NM_014806 | |nearest_refseq=NM_014806 | ||
|nearest_unigene=Hs.493796 | |nearest_unigene=Hs.493796 | ||
| + | |num_trans=0 | ||
| + | |species=human | ||
| + | |start=35491624 | ||
| + | |strand=- | ||
|tata_box="-34(GACTTTATAAAG,-,0.00),-32(CTTTATAAAGAC,+,0.00)" | |tata_box="-34(GACTTTATAAAG,-,0.00),-32(CTTTATAAAGAC,+,0.00)" | ||
| + | |transcript_name= | ||
| + | |tss_classification=no | ||
|tss_id=hg_100581.1 | |tss_id=hg_100581.1 | ||
| + | |tss_score=1 | ||
}} | }} | ||
Revision as of 17:12, 8 March 2018
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | |
|---|---|
| Distance: | |
| Num_trans: | 0 |
| All_trans: |
TATA-Box annotation
| Distance to TSS: | 1793 |
|---|---|
| Nearest PromoterID: | NR_052015 |
| Entrez ID: | 9853 |
| Nearest Unigene: | Hs.493796 |
| Nearest Refseq: | NM_014806 |
| Nearest Ensembl: | ENSG00000198853 |
| Gene Name: | RUSC2 |
| Gene Alias: | Iporin |
| Gene Description: | RUN and SH3 domain containing 2 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.487562 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GACTTTATAAAG,-,0.00),-32(CTTTATAAAGAC,+,0.00)" |
