Difference between revisions of "TSS:Mm 123919.1"
From referenceTSS
| Line 5: | Line 5: | ||
|D14Sel6= | |D14Sel6= | ||
|E25BMM= | |E25BMM= | ||
| − | |all_trans=AK008861:14 AK200695:-44 AK210559:-46 | + | |all_trans=AK008861:14 LF241976:-25 MA477553:-25 AK200695:-44 AK210559:-46 LF241977:-96 MA477554:-96 LF200073:-116 MA435650:-116 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.045 | |cpg_percent=0.045 | ||
|distance=14 | |distance=14 | ||
| − | |distance_to_tss= | + | |distance_to_tss=20716 |
|end=73364578 | |end=73364578 | ||
|end_of_center_position=73364574 | |end_of_center_position=73364574 | ||
|entrez_id=16432 | |entrez_id=16432 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| − | |gene_alias=AI256040 | + | |gene_alias=AI256040{{!}}Bri{{!}}Bri2{{!}}Bricd2b{{!}}D14Sel6{{!}}E25BMM{{!}}imBRI2 |
|gene_description=integral membrane protein 2B | |gene_description=integral membrane protein 2B | ||
|gene_id=16432 | |gene_id=16432 | ||
| Line 28: | Line 28: | ||
|nearest_refseq=NM_008410 | |nearest_refseq=NM_008410 | ||
|nearest_unigene=Mm.4266 | |nearest_unigene=Mm.4266 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=mouse | |species=mouse | ||
|start=73364568 | |start=73364568 | ||
Revision as of 01:25, 20 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 73364573 |
|---|---|
| End of the center position in the TSS region: | 73364574 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | AK008861 |
|---|---|
| Distance: | 14 |
| Num_trans: | 9 |
| All_trans: | AK008861:14 LF241976:-25 MA477553:-25 AK200695:-44 AK210559:-46 LF241977:-96 MA477554:-96 LF200073:-116 MA435650:-116 |
TATA-Box annotation
| Distance to TSS: | 20716 |
|---|---|
| Nearest PromoterID: | NM_008410 |
| Entrez ID: | 16432 |
| Nearest Unigene: | Mm.4266 |
| Nearest Refseq: | NM_008410 |
| Nearest Ensembl: | ENSMUSG00000022108 |
| Gene Name: | integral membrane protein 2B |
| Gene Alias: | AI256040|Bri|Bri2|Bricd2b|D14Sel6|E25BMM|imBRI2 |
| Gene Description: | integral membrane protein 2B |
| Gene Type: | protein-coding |
| CpG%: | 0.045 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
