Difference between revisions of "TSS:Hg 40711.1"
From referenceTSS
| Line 2: | Line 2: | ||
|ACK-1= | |ACK-1= | ||
|ACK1= | |ACK1= | ||
| − | |all_trans=ENST00000458180.1:0 | + | |all_trans=ENST00000458180.1:0 NR_145450:0 AK127609:0 |
|chr=chr3 | |chr=chr3 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=6 |
|end=195908095 | |end=195908095 | ||
|end_of_center_position=195908083 | |end_of_center_position=195908083 | ||
| − | |entrez_id= | + | |entrez_id=100128262 |
|gc_percent=0.557214 | |gc_percent=0.557214 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=TNK2 antisense RNA 1 |
|gene_id=100128262 | |gene_id=100128262 | ||
|gene_name=TNK2 antisense RNA 1 | |gene_name=TNK2 antisense RNA 1 | ||
| Line 18: | Line 18: | ||
|gene_symbol=TNK2-AS1 | |gene_symbol=TNK2-AS1 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id=HGNC:49093 | |hgnc_mgi_id=HGNC:49093 | ||
| − | |nearest_ensembl= | + | |nearest_ensembl= |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_145450 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_145450 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.605240 |
|num_trans=3 | |num_trans=3 | ||
|p21cdc42Hs= | |p21cdc42Hs= | ||
| Line 30: | Line 30: | ||
|start_of_center_position=195908082 | |start_of_center_position=195908082 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000458180.1 | + | |transcript_name=ENST00000458180.1 NR_145450 AK127609 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_40711.1 | |tss_id=hg_40711.1 | ||
Revision as of 23:16, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 195908082 |
|---|---|
| End of the center position in the TSS region: | 195908083 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000458180.1 NR_145450 AK127609 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000458180.1:0 NR_145450:0 AK127609:0 |
TATA-Box annotation
| Distance to TSS: | 6 |
|---|---|
| Nearest PromoterID: | NR_145450 |
| Entrez ID: | 100128262 |
| Nearest Unigene: | Hs.605240 |
| Nearest Refseq: | NR_145450 |
| Nearest Ensembl: | |
| Gene Name: | TNK2 antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | TNK2 antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.03 |
| GC%: | 0.557214 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
