Difference between revisions of "TSS:Mm 72104.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENSMUST00000125525.7:59 | + | |all_trans=ENSMUST00000125525.7:59 ENSMUST00000127285.1:143 AK163580:143 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.085 | |cpg_percent=0.085 | ||
| Line 10: | Line 10: | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
|gene_alias=Bcnp1 | |gene_alias=Bcnp1 | ||
| − | |gene_description= | + | |gene_description=family with sequence similarity 129, member C |
|gene_id=100037278 | |gene_id=100037278 | ||
| − | |gene_name= | + | |gene_name=niban apoptosis regulator 3 |
|gene_source=MGI:3686743 | |gene_source=MGI:3686743 | ||
| − | |gene_symbol= | + | |gene_symbol=Niban3 |
| − | |gene_synonyms=Bcnp1 | + | |gene_synonyms=Bcnp1 Fam129c |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=MGI:3686743 | |hgnc_mgi_id=MGI:3686743 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_001166213 | |nearest_refseq=NM_001166213 | ||
|nearest_unigene=Mm.482159 | |nearest_unigene=Mm.482159 | ||
| − | |num_trans= | + | |num_trans=3 |
|species=mouse | |species=mouse | ||
|start=71602170 | |start=71602170 | ||
Revision as of 17:36, 21 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 71602189 |
|---|---|
| End of the center position in the TSS region: | 71602190 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000125525.7 |
|---|---|
| Distance: | 59 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000125525.7:59 ENSMUST00000127285.1:143 AK163580:143 |
TATA-Box annotation
| Distance to TSS: | 4543 |
|---|---|
| Nearest PromoterID: | NM_001166213 |
| Entrez ID: | 100037278 |
| Nearest Unigene: | Mm.482159 |
| Nearest Refseq: | NM_001166213 |
| Nearest Ensembl: | ENSMUSG00000043243 |
| Gene Name: | niban apoptosis regulator 3 |
| Gene Alias: | Bcnp1 |
| Gene Description: | family with sequence similarity 129, member C |
| Gene Type: | protein-coding |
| CpG%: | 0.085 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
