Difference between revisions of "TSS:Hg 128797.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000376617.3 | + | |all_trans=ENST00000376617.3:15 ENST00000543317.1:-25 NR_024563:-25 AK123118:54 |
|chr=chr12 | |chr=chr12 | ||
|cpg_percent=0.04 | |cpg_percent=0.04 | ||
| Line 12: | Line 12: | ||
|gene_description=uncharacterized LOC100130238 | |gene_description=uncharacterized LOC100130238 | ||
|gene_id=100130238 | |gene_id=100130238 | ||
| − | |gene_name= | + | |gene_name=LOC100130238 |
|gene_source=EntrezGene:100130238 | |gene_source=EntrezGene:100130238 | ||
|gene_symbol=LOC100130238 | |gene_symbol=LOC100130238 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NR_024563 | |nearest_refseq=NR_024563 | ||
|nearest_unigene=Hs.536338 | |nearest_unigene=Hs.536338 | ||
| − | |num_trans= | + | |num_trans=4 |
|species=human | |species=human | ||
|start=132275415 | |start=132275415 | ||
|start_of_center_position=132275422 | |start_of_center_position=132275422 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000376617.3 | + | |transcript_name=ENST00000376617.3 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_128797.1 | |tss_id=hg_128797.1 | ||
Latest revision as of 03:17, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 132275422 |
|---|---|
| End of the center position in the TSS region: | 132275423 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000376617.3 |
|---|---|
| Distance: | 15 |
| Num_trans: | 4 |
| All_trans: | ENST00000376617.3:15 ENST00000543317.1:-25 NR_024563:-25 AK123118:54 |
TATA-Box annotation
| Distance to TSS: | 31 |
|---|---|
| Nearest PromoterID: | NR_024563 |
| Entrez ID: | 100130238 |
| Nearest Unigene: | Hs.536338 |
| Nearest Refseq: | NR_024563 |
| Nearest Ensembl: | |
| Gene Name: | LOC100130238 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100130238 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.616915 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
