Difference between revisions of "TSS:Hg 136491.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
− | |all_trans=ENST00000471771.5 | + | |all_trans=ENST00000471771.5:-28 ENST00000461838.5:-118 ENST00000485959.5:-130 ENST00000493719.5:-151 BC039599:-175 NM_001166262:-176 ENST00000460973.5:-183 NM_001166261:-184 LF384075:-184 MA619652:-184 ENST00000464753.1:-186 DQ575760:-282 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.055 | |cpg_percent=0.055 | ||
Line 22: | Line 22: | ||
|nearest_refseq=NM_152912 | |nearest_refseq=NM_152912 | ||
|nearest_unigene=Hs.534582 | |nearest_unigene=Hs.534582 | ||
− | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=27449998 | |start=27449998 | ||
|start_of_center_position=27450005 | |start_of_center_position=27450005 | ||
|strand=- | |strand=- | ||
− | |transcript_name=ENST00000471771.5 | + | |transcript_name=ENST00000471771.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_136491.1 | |tss_id=hg_136491.1 |
Revision as of 06:15, 16 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 27450005 |
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End of the center position in the TSS region: | 27450006 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | ENST00000471771.5 |
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Distance: | -28 |
Num_trans: | 12 |
All_trans: | ENST00000471771.5:-28 ENST00000461838.5:-118 ENST00000485959.5:-130 ENST00000493719.5:-151 BC039599:-175 NM_001166262:-176 ENST00000460973.5:-183 NM_001166261:-184 LF384075:-184 MA619652:-184 ENST00000464753.1:-186 DQ575760:-282 |
TATA-Box annotation
Distance to TSS: | 183 |
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Nearest PromoterID: | NM_001166262 |
Entrez ID: | 219402 |
Nearest Unigene: | Hs.534582 |
Nearest Refseq: | NM_152912 |
Nearest Ensembl: | ENSG00000122033 |
Gene Name: | mitochondrial translational initiation factor 3 |
Gene Alias: | IF3mt |
Gene Description: | mitochondrial translational initiation factor 3 |
Gene Type: | protein-coding |
CpG%: | 0.055 |
GC%: | 0.60199 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |