Difference between revisions of "TSS:Hg 136493.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=ENST00000471771.5 | + | |all_trans=ENST00000471771.5:-1 ENST00000461838.5:-91 ENST00000485959.5:-103 ENST00000493719.5:-124 BC039599:-148 NM_001166262:-149 ENST00000460973.5:-156 NM_001166261:-157 LF384075:-157 MA619652:-157 ENST00000464753.1:-159 DQ575760:-255 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_152912 | |nearest_refseq=NM_152912 | ||
|nearest_unigene=Hs.534582 | |nearest_unigene=Hs.534582 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=27450029 | |start=27450029 | ||
|start_of_center_position=27450034 | |start_of_center_position=27450034 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000471771.5 | + | |transcript_name=ENST00000471771.5 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_136493.1 | |tss_id=hg_136493.1 | ||
Revision as of 06:15, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 27450034 |
|---|---|
| End of the center position in the TSS region: | 27450035 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000471771.5 |
|---|---|
| Distance: | -1 |
| Num_trans: | 12 |
| All_trans: | ENST00000471771.5:-1 ENST00000461838.5:-91 ENST00000485959.5:-103 ENST00000493719.5:-124 BC039599:-148 NM_001166262:-149 ENST00000460973.5:-156 NM_001166261:-157 LF384075:-157 MA619652:-157 ENST00000464753.1:-159 DQ575760:-255 |
TATA-Box annotation
| Distance to TSS: | 154 |
|---|---|
| Nearest PromoterID: | NM_001166262 |
| Entrez ID: | 219402 |
| Nearest Unigene: | Hs.534582 |
| Nearest Refseq: | NM_152912 |
| Nearest Ensembl: | ENSG00000122033 |
| Gene Name: | mitochondrial translational initiation factor 3 |
| Gene Alias: | IF3mt |
| Gene Description: | mitochondrial translational initiation factor 3 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
