Difference between revisions of "TSS:Mm 76557.1"
From referenceTSS
Line 2: | Line 2: | ||
|CELTIX1= | |CELTIX1= | ||
|Ptpn13ip= | |Ptpn13ip= | ||
− | |all_trans=AF084259:-31 | + | |all_trans=AF084259:-31 NM_001377016:-50 NM_012047:-50 NM_001377017:-50 NM_001377013:-50 NR_165043:-50 NR_165044:-50 NR_165045:-50 NM_001377014:-50 NM_001377015:-50 AK142758:-53 ENSMUST00000034085.7:-72 AK138934:-72 ENSMUST00000135471.1:95 AK160638:151 BC166008:154 |
|chr=chr8 | |chr=chr8 | ||
|cpg_percent=0.17 | |cpg_percent=0.17 | ||
Line 11: | Line 11: | ||
|entrez_id=26992 | |entrez_id=26992 | ||
|gc_percent=0.746269 | |gc_percent=0.746269 | ||
− | |gene_alias=BP75 | + | |gene_alias=BP75{{!}}CELTIX1{{!}}Ptpn13ip |
|gene_description=bromodomain containing 7 | |gene_description=bromodomain containing 7 | ||
|gene_id=26992 | |gene_id=26992 | ||
Line 24: | Line 24: | ||
|nearest_refseq=NM_012047 | |nearest_refseq=NM_012047 | ||
|nearest_unigene=Mm.5400 | |nearest_unigene=Mm.5400 | ||
− | |num_trans= | + | |num_trans=16 |
|species=mouse | |species=mouse | ||
|start=88362108 | |start=88362108 |
Revision as of 19:17, 21 June 2021
Basic information about the TSS
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Start of the center position in the TSS region: | 88362115 |
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End of the center position in the TSS region: | 88362116 |
Gene and protein annotation
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Transcript annotation
Transcript_name: | AF084259 |
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Distance: | -31 |
Num_trans: | 16 |
All_trans: | AF084259:-31 NM_001377016:-50 NM_012047:-50 NM_001377017:-50 NM_001377013:-50 NR_165043:-50 NR_165044:-50 NR_165045:-50 NM_001377014:-50 NM_001377015:-50 AK142758:-53 ENSMUST00000034085.7:-72 AK138934:-72 ENSMUST00000135471.1:95 AK160638:151 BC166008:154 |
TATA-Box annotation
Distance to TSS: | 76 |
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Nearest PromoterID: | NM_012047 |
Entrez ID: | 26992 |
Nearest Unigene: | Mm.5400 |
Nearest Refseq: | NM_012047 |
Nearest Ensembl: | ENSMUSG00000031660 |
Gene Name: | bromodomain containing 7 |
Gene Alias: | BP75|CELTIX1|Ptpn13ip |
Gene Description: | bromodomain containing 7 |
Gene Type: | protein-coding |
CpG%: | 0.17 |
GC%: | 0.746269 |
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |