Difference between revisions of "TSS:Hg 220993.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|LYST2= | |LYST2= | ||
| − | |all_trans=BX640760:162 | + | |all_trans=ENST00000629018.3:162 BX640760:162 |
|chr=chr13 | |chr=chr13 | ||
|cpg_percent=0.03 | |cpg_percent=0.03 | ||
| Line 10: | Line 10: | ||
|entrez_id=26960 | |entrez_id=26960 | ||
|gc_percent=0.41791 | |gc_percent=0.41791 | ||
| − | |gene_alias=BCL8B | + | |gene_alias=BCL8B{{!}}LYST2 |
|gene_description=neurobeachin | |gene_description=neurobeachin | ||
|gene_id=26960 | |gene_id=26960 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_015678 | |nearest_refseq=NM_015678 | ||
|nearest_unigene=Hs.491172 | |nearest_unigene=Hs.491172 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=35161757 | |start=35161757 | ||
|start_of_center_position=35161757 | |start_of_center_position=35161757 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=BX640760 | + | |transcript_name=ENST00000629018.3 BX640760 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_220993.1 | |tss_id=hg_220993.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=Q6N008 | + | |uniprot_id=A0A0D9SF28 Q6N008 |
}} | }} | ||
Revision as of 08:31, 17 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 35161757 |
|---|---|
| End of the center position in the TSS region: | 35161758 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000629018.3 BX640760 |
|---|---|
| Distance: | 162 |
| Num_trans: | 2 |
| All_trans: | ENST00000629018.3:162 BX640760:162 |
TATA-Box annotation
| Distance to TSS: | 219471 |
|---|---|
| Nearest PromoterID: | NM_015678 |
| Entrez ID: | 26960 |
| Nearest Unigene: | Hs.491172 |
| Nearest Refseq: | NM_015678 |
| Nearest Ensembl: | ENSG00000172915 |
| Gene Name: | neurobeachin |
| Gene Alias: | BCL8B|LYST2 |
| Gene Description: | neurobeachin |
| Gene Type: | protein-coding |
| CpG%: | 0.03 |
| GC%: | 0.41791 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
