Difference between revisions of "TSS:Hg 53381.1"
From referenceTSS
| Line 4: | Line 4: | ||
|PP3105= | |PP3105= | ||
|ZIP8= | |ZIP8= | ||
| − | |all_trans=ENST00000356736. | + | |all_trans=ENST00000356736.5:0 ENST00000512657.5:0 NM_001135146:0 BC012125:0 AF193052:21 ENST00000514000.5:33 NM_001135147:217 ENST00000424970.6:265 AK304274:265 NM_022154:279 ENST00000394833.6:331 AB040120:331 |
|chr=chr4 | |chr=chr4 | ||
|cpg_percent=0.075 | |cpg_percent=0.075 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=2 |
|end=102345490 | |end=102345490 | ||
|end_of_center_position=102345480 | |end_of_center_position=102345480 | ||
|entrez_id=64116 | |entrez_id=64116 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=BIGM103 | + | |gene_alias=BIGM103{{!}}CDG2N{{!}}LZT-Hs6{{!}}PP3105{{!}}ZIP8 |
|gene_description=solute carrier family 39 member 8 | |gene_description=solute carrier family 39 member 8 | ||
|gene_id=64116 | |gene_id=64116 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_022154 | |nearest_refseq=NM_022154 | ||
|nearest_unigene=Hs.288034 | |nearest_unigene=Hs.288034 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=102345469 | |start=102345469 | ||
|start_of_center_position=102345479 | |start_of_center_position=102345479 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000356736. | + | |transcript_name=ENST00000356736.5 ENST00000512657.5 NM_001135146 BC012125 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_53381.1 | |tss_id=hg_53381.1 | ||
Revision as of 04:11, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 102345479 |
|---|---|
| End of the center position in the TSS region: | 102345480 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000356736.5 ENST00000512657.5 NM_001135146 BC012125 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | ENST00000356736.5:0 ENST00000512657.5:0 NM_001135146:0 BC012125:0 AF193052:21 ENST00000514000.5:33 NM_001135147:217 ENST00000424970.6:265 AK304274:265 NM_022154:279 ENST00000394833.6:331 AB040120:331 |
TATA-Box annotation
| Distance to TSS: | 2 |
|---|---|
| Nearest PromoterID: | NM_001135146 |
| Entrez ID: | 64116 |
| Nearest Unigene: | Hs.288034 |
| Nearest Refseq: | NM_022154 |
| Nearest Ensembl: | ENSG00000138821 |
| Gene Name: | solute carrier family 39 member 8 |
| Gene Alias: | BIGM103|CDG2N|LZT-Hs6|PP3105|ZIP8 |
| Gene Description: | solute carrier family 39 member 8 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
