Difference between revisions of "TSS:Hg 56652.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| − | |all_trans=AY358733:0 ENST00000491184.2 | + | |all_trans=AY358733:0 ENST00000491184.2:1 BC110838:10 AY280614:16 ENST00000448151.2:-33 ENST00000409534.1:-49 BX649157:-49 ENST00000334994.6:-51 NM_181506:-51 NR_073584:-135 AK123022:-135 LP895513:-135 |
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=53 |
|end=62578874 | |end=62578874 | ||
|end_of_center_position=62578872 | |end_of_center_position=62578872 | ||
| Line 22: | Line 22: | ||
|nearest_refseq=NM_181506 | |nearest_refseq=NM_181506 | ||
|nearest_unigene=Hs.721348 | |nearest_unigene=Hs.721348 | ||
| − | |num_trans= | + | |num_trans=12 |
|species=human | |species=human | ||
|start=62578869 | |start=62578869 | ||
Revision as of 05:27, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 62578871 |
|---|---|
| End of the center position in the TSS region: | 62578872 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AY358733 |
|---|---|
| Distance: | 0 |
| Num_trans: | 12 |
| All_trans: | AY358733:0 ENST00000491184.2:1 BC110838:10 AY280614:16 ENST00000448151.2:-33 ENST00000409534.1:-49 BX649157:-49 ENST00000334994.6:-51 NM_181506:-51 NR_073584:-135 AK123022:-135 LP895513:-135 |
TATA-Box annotation
| Distance to TSS: | 53 |
|---|---|
| Nearest PromoterID: | NM_181506 |
| Entrez ID: | 100130733 |
| Nearest Unigene: | Hs.721348 |
| Nearest Refseq: | NM_181506 |
| Nearest Ensembl: | ENSG00000186105 |
| Gene Name: | leucine rich repeat containing 70 |
| Gene Alias: | SLRN |
| Gene Description: | leucine rich repeat containing 70 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.343284 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
