Difference between revisions of "TSS:Hg 100649.1"
From referenceTSS
(Created page with "{{TSSDetail |cpg_percent=0.1 |distance_to_tss=20 |entrez_id=7094 |gc_percent=0.691542 |gene_alias=ILWEQ|TLN |gene_description=talin 1 |gene_name=TLN1 |gene_type=protein-coding...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TLN= | ||
| + | |all_trans=AB028950:0 BC021005:5 ENST00000314888.9:-11 NM_006289:-11 uc003zxt.3:-11 BC042923:185 AF078828:217 AF177198:235 ENST00000378192.2:262 uc064syo.1:262 BC020881:262 | ||
| + | |chr=chr9 | ||
|cpg_percent=0.1 | |cpg_percent=0.1 | ||
| + | |distance=0 | ||
|distance_to_tss=20 | |distance_to_tss=20 | ||
| + | |end=35732384 | ||
|entrez_id=7094 | |entrez_id=7094 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
|gene_alias=ILWEQ|TLN | |gene_alias=ILWEQ|TLN | ||
|gene_description=talin 1 | |gene_description=talin 1 | ||
| − | |gene_name=TLN1 | + | |gene_id=7094 |
| + | |gene_name=talin 1 | ||
| + | |gene_source=HGNC:11845 | ||
| + | |gene_symbol=TLN1 | ||
| + | |gene_synonyms=ILWEQ | ||
|gene_type=protein-coding | |gene_type=protein-coding | ||
| + | |hgnc_mgi_id=HGNC:11845 | ||
|nearest_ensembl=ENSG00000137076 | |nearest_ensembl=ENSG00000137076 | ||
|nearest_promoter_id=NM_006289 | |nearest_promoter_id=NM_006289 | ||
|nearest_refseq=NM_006289 | |nearest_refseq=NM_006289 | ||
|nearest_unigene=Hs.471014 | |nearest_unigene=Hs.471014 | ||
| + | |num_trans=11 | ||
| + | |species=human | ||
| + | |start=35732365 | ||
| + | |strand=- | ||
| + | |transcript_name=AB028950 | ||
| + | |tss_classification=yes | ||
|tss_id=hg_100649.1 | |tss_id=hg_100649.1 | ||
| + | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 17:13, 8 March 2018
Basic information about the TSS
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| Start of the center position in the TSS region: | |
|---|---|
| End of the center position in the TSS region: |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | AB028950 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | AB028950:0 BC021005:5 ENST00000314888.9:-11 NM_006289:-11 uc003zxt.3:-11 BC042923:185 AF078828:217 AF177198:235 ENST00000378192.2:262 uc064syo.1:262 BC020881:262 |
TATA-Box annotation
| Distance to TSS: | 20 |
|---|---|
| Nearest PromoterID: | NM_006289 |
| Entrez ID: | 7094 |
| Nearest Unigene: | Hs.471014 |
| Nearest Refseq: | NM_006289 |
| Nearest Ensembl: | ENSG00000137076 |
| Gene Name: | talin 1 |
| Gene Alias: | ILWEQ |
| Gene Description: | talin 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.1 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
