Difference between revisions of "TSS:Hg 141846.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|ZNF925= | |ZNF925= | ||
| − | |all_trans=BC157833:65 BC171822:65 | + | |all_trans=ENST00000342537.8:0 NM_001137601:0 BC157833:65 BC171822:65 KJ900810:91 ENST00000555360.1:-491 |
|chr=chr14 | |chr=chr14 | ||
|cpg_percent=0.145 | |cpg_percent=0.145 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss=- | + | |distance_to_tss=-5 |
|end=104801106 | |end=104801106 | ||
|end_of_center_position=104801097 | |end_of_center_position=104801097 | ||
|entrez_id=100128927 | |entrez_id=100128927 | ||
|gc_percent=0.706468 | |gc_percent=0.706468 | ||
| − | |gene_alias=LCCS6 | + | |gene_alias=LCCS6{{!}}ZNF925 |
|gene_description=zinc finger and BTB domain containing 42 | |gene_description=zinc finger and BTB domain containing 42 | ||
|gene_id=100128927 | |gene_id=100128927 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_001137601 | |nearest_refseq=NM_001137601 | ||
|nearest_unigene=Hs.170853 | |nearest_unigene=Hs.170853 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=104801086 | |start=104801086 | ||
|start_of_center_position=104801096 | |start_of_center_position=104801096 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000342537.8 NM_001137601 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_141846.1 | |tss_id=hg_141846.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=B2RXF5 |
}} | }} | ||
Revision as of 08:20, 16 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 104801096 |
|---|---|
| End of the center position in the TSS region: | 104801097 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000342537.8 NM_001137601 |
|---|---|
| Distance: | 0 |
| Num_trans: | 6 |
| All_trans: | ENST00000342537.8:0 NM_001137601:0 BC157833:65 BC171822:65 KJ900810:91 ENST00000555360.1:-491 |
TATA-Box annotation
| Distance to TSS: | -5 |
|---|---|
| Nearest PromoterID: | NM_001137601 |
| Entrez ID: | 100128927 |
| Nearest Unigene: | Hs.170853 |
| Nearest Refseq: | NM_001137601 |
| Nearest Ensembl: | ENSG00000179627 |
| Gene Name: | zinc finger and BTB domain containing 42 |
| Gene Alias: | LCCS6|ZNF925 |
| Gene Description: | zinc finger and BTB domain containing 42 |
| Gene Type: | protein-coding |
| CpG%: | 0.145 |
| GC%: | 0.706468 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
