Difference between revisions of "TSS:Hg 145560.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |all_trans=ENST00000665071.1:0 ENST00000659028.1:-13 | ||
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.025 | |cpg_percent=0.025 | ||
| − | |distance= | + | |distance=0 |
|distance_to_tss=-87476 | |distance_to_tss=-87476 | ||
|end=26028341 | |end=26028341 | ||
| Line 10: | Line 11: | ||
|gene_alias=- | |gene_alias=- | ||
|gene_description=long intergenic non-protein coding RNA 929 | |gene_description=long intergenic non-protein coding RNA 929 | ||
| − | |gene_name= | + | |gene_id=100128714 |
| + | |gene_name=long intergenic non-protein coding RNA 2346 | ||
| + | |gene_source=HGNC:53268 | ||
| + | |gene_symbol=LINC02346 | ||
| + | |gene_synonyms= | ||
|gene_type=ncRNA | |gene_type=ncRNA | ||
| + | |hgnc_mgi_id=HGNC:53268 | ||
|nearest_ensembl=ENSG00000259150 | |nearest_ensembl=ENSG00000259150 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_038851 |
|nearest_refseq=NR_038851 | |nearest_refseq=NR_038851 | ||
|nearest_unigene=Hs.371380 | |nearest_unigene=Hs.371380 | ||
| − | |num_trans= | + | |num_trans=2 |
|species=human | |species=human | ||
|start=26028332 | |start=26028332 | ||
|start_of_center_position=26028336 | |start_of_center_position=26028336 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name= | + | |transcript_name=ENST00000665071.1 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_145560.1 | |tss_id=hg_145560.1 | ||
|tss_score=1 | |tss_score=1 | ||
| + | |uniprot_id= | ||
}} | }} | ||
Revision as of 09:46, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26028336 |
|---|---|
| End of the center position in the TSS region: | 26028337 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000665071.1 |
|---|---|
| Distance: | 0 |
| Num_trans: | 2 |
| All_trans: | ENST00000665071.1:0 ENST00000659028.1:-13 |
TATA-Box annotation
| Distance to TSS: | -87476 |
|---|---|
| Nearest PromoterID: | NR_038851 |
| Entrez ID: | 503519 |
| Nearest Unigene: | Hs.371380 |
| Nearest Refseq: | NR_038851 |
| Nearest Ensembl: | ENSG00000259150 |
| Gene Name: | long intergenic non-protein coding RNA 2346 |
| Gene Alias: | - |
| Gene Description: | long intergenic non-protein coding RNA 929 |
| Gene Type: | ncRNA |
| CpG%: | 0.025 |
| GC%: | 0.482587 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
