Difference between revisions of "TSS:Hg 147939.1"
From referenceTSS
| Line 6: | Line 6: | ||
|H-GRF55= | |H-GRF55= | ||
|PP13187= | |PP13187= | ||
| − | |all_trans=ENST00000316148.4:0 | + | |all_trans=ENST00000316148.4:0 NR_148998:0 AK097337:0 |
|chr=chr15 | |chr=chr15 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-1 |
|end=78978893 | |end=78978893 | ||
|end_of_center_position=78978889 | |end_of_center_position=78978889 | ||
| − | |entrez_id= | + | |entrez_id=100129540 |
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC100129540 |
| − | |gene_id= | + | |gene_id=100129540 |
| − | |gene_name= | + | |gene_name=uncharacterized LOC100129540 |
| − | |gene_type= | + | |gene_source=EntrezGene:100129540 |
| + | |gene_symbol=LOC100129540 | ||
| + | |gene_synonyms= | ||
| + | |gene_type=ncRNA | ||
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000177699 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_148998 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_148998 |
|nearest_unigene=Hs.459035 | |nearest_unigene=Hs.459035 | ||
|num_trans=3 | |num_trans=3 | ||
| Line 31: | Line 34: | ||
|start_of_center_position=78978888 | |start_of_center_position=78978888 | ||
|strand=+ | |strand=+ | ||
| − | |transcript_name=ENST00000316148.4 | + | |transcript_name=ENST00000316148.4 NR_148998 AK097337 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_147939.1 | |tss_id=hg_147939.1 | ||
Revision as of 10:41, 16 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 78978888 |
|---|---|
| End of the center position in the TSS region: | 78978889 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000316148.4 NR_148998 AK097337 |
|---|---|
| Distance: | 0 |
| Num_trans: | 3 |
| All_trans: | ENST00000316148.4:0 NR_148998:0 AK097337:0 |
TATA-Box annotation
| Distance to TSS: | -1 |
|---|---|
| Nearest PromoterID: | NR_148998 |
| Entrez ID: | 100129540 |
| Nearest Unigene: | Hs.459035 |
| Nearest Refseq: | NR_148998 |
| Nearest Ensembl: | ENSG00000177699 |
| Gene Name: | uncharacterized LOC100129540 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100129540 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
