Difference between revisions of "TSS:Hg 64798.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|SLP76= | |SLP76= | ||
| − | |all_trans= | + | |all_trans=NR_147701:-113 AK125708:-113 ENST00000511921.2:-203 |
|chr=chr5 | |chr=chr5 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=-113 | |distance=-113 | ||
| − | |distance_to_tss= | + | |distance_to_tss=116 |
|end=170312603 | |end=170312603 | ||
|end_of_center_position=170312600 | |end_of_center_position=170312600 | ||
| − | |entrez_id= | + | |entrez_id=100128059 |
|gc_percent=0.527363 | |gc_percent=0.527363 | ||
| − | |gene_alias= | + | |gene_alias=- |
| − | |gene_description= | + | |gene_description=uncharacterized LOC100128059 |
|gene_id=100128059 | |gene_id=100128059 | ||
|gene_name=uncharacterized LOC100128059 | |gene_name=uncharacterized LOC100128059 | ||
| Line 17: | Line 17: | ||
|gene_symbol=LOC100128059 | |gene_symbol=LOC100128059 | ||
|gene_synonyms= | |gene_synonyms= | ||
| − | |gene_type= | + | |gene_type=ncRNA |
|hgnc_mgi_id= | |hgnc_mgi_id= | ||
| − | |nearest_ensembl= | + | |nearest_ensembl=ENSG00000250274 |
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NR_147701 |
| − | |nearest_refseq= | + | |nearest_refseq=NR_147701 |
| − | |nearest_unigene=Hs. | + | |nearest_unigene=Hs.587351 |
|num_trans=3 | |num_trans=3 | ||
|species=human | |species=human | ||
| Line 28: | Line 28: | ||
|start_of_center_position=170312599 | |start_of_center_position=170312599 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NR_147701 AK125708 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_64798.1 | |tss_id=hg_64798.1 | ||
Revision as of 08:36, 18 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 170312599 |
|---|---|
| End of the center position in the TSS region: | 170312600 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NR_147701 AK125708 |
|---|---|
| Distance: | -113 |
| Num_trans: | 3 |
| All_trans: | NR_147701:-113 AK125708:-113 ENST00000511921.2:-203 |
TATA-Box annotation
| Distance to TSS: | 116 |
|---|---|
| Nearest PromoterID: | NR_147701 |
| Entrez ID: | 100128059 |
| Nearest Unigene: | Hs.587351 |
| Nearest Refseq: | NR_147701 |
| Nearest Ensembl: | ENSG00000250274 |
| Gene Name: | uncharacterized LOC100128059 |
| Gene Alias: | - |
| Gene Description: | uncharacterized LOC100128059 |
| Gene Type: | ncRNA |
| CpG%: | 0.015 |
| GC%: | 0.527363 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
