Difference between revisions of "TSS:Mm 147186.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000180516.2:0 ENSMUST00000181887.1:0 ENSMUST00000192479.1:0 uc008epl.1:0 AK042845:0 AK136271:0 AK046617:0 AK080748:31 |chr=chr18 |cpg_percent=0...") |
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| Line 6: | Line 6: | ||
|distance_to_tss=34543 | |distance_to_tss=34543 | ||
|end=37178531 | |end=37178531 | ||
| + | |end_of_center_position=37178513 | ||
|entrez_id=353237 | |entrez_id=353237 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| Line 24: | Line 25: | ||
|species=mouse | |species=mouse | ||
|start=37178493 | |start=37178493 | ||
| + | |start_of_center_position=37178512 | ||
|strand=- | |strand=- | ||
|tata_box="-46(GGCTATTAAATG,-,0.00)" | |tata_box="-46(GGCTATTAAATG,-,0.00)" | ||
Revision as of 16:04, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 37178512 |
|---|---|
| End of the center position in the TSS region: | 37178513 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000180516.2 ENSMUST00000181887.1 ENSMUST00000192479.1 uc008epl.1 AK042845 AK136271 AK046617 |
|---|---|
| Distance: | 0 |
| Num_trans: | 8 |
| All_trans: | ENSMUST00000180516.2:0 ENSMUST00000181887.1:0 ENSMUST00000192479.1:0 uc008epl.1:0 AK042845:0 AK136271:0 AK046617:0 AK080748:31 |
TATA-Box annotation
| Distance to TSS: | 34543 |
|---|---|
| Nearest PromoterID: | NM_001003672 |
| Entrez ID: | 353237 |
| Nearest Unigene: | Mm.308500 |
| Nearest Refseq: | NM_001003672 |
| Nearest Ensembl: | ENSMUSG00000102697 |
| Gene Name: | predicted gene 10544 |
| Gene Alias: | CNRc2 |
| Gene Description: | "protocadherin alpha subfamily C, 2" |
| Gene Type: | protein-coding |
| CpG%: | 0.035 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-46(GGCTATTAAATG,-,0.00)" |
