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Difference between revisions of "TSS:Hg 72653.1"

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(Created page with "{{TSSDetail |all_trans=LC027945:78 LC027946:78 LC050979:78 LC050980:78 LC050981:78 LC050982:78 LC050983:78 LC050984:78 LC050985:78 LC050986:78 LC050987:78 LC050988:78 LC050989...")
 
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|distance_to_tss=-8502
 
|distance_to_tss=-8502
 
|end=31186408
 
|end=31186408
 +
|end_of_center_position=31186402
 
|entrez_id=100130889
 
|entrez_id=100130889
 
|gc_percent=0.467662
 
|gc_percent=0.467662
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|species=human
 
|species=human
 
|start=31186394
 
|start=31186394
 +
|start_of_center_position=31186401
 
|strand=-
 
|strand=-
 
|tata_box="-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)"
 
|tata_box="-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)"

Revision as of 17:36, 14 May 2019

Basic information about the TSS


TSS ID:hg_72653.1
Species:human
Chr:chr6
TSS Classification:no
Start:31186394
End:31186408
Strand:-
TSS Score:1
Start of the center position in the TSS region:31186401
End of the center position in the TSS region:31186402



Gene and protein annotation


Transcript_name:LC027945 LC027946 LC050979 LC050980 LC050981 LC050982 LC050983 LC050984 LC050985 LC050986 LC050987 LC050988 LC050989 LC050990 LC050991
Distance:78
GeneID:100130889
HGNC/MGI_ID:HGNC:17203
UniProt_ID:
Gene_name:psoriasis susceptibility 1 candidate 3 (non-protein coding)
Gene_symbol:PSORS1C3
Gene_synonyms:NCRNA00196
Gene_source:HGNC:17203



Transcript annotation


Transcript_name:LC027945 LC027946 LC050979 LC050980 LC050981 LC050982 LC050983 LC050984 LC050985 LC050986 LC050987 LC050988 LC050989 LC050990 LC050991
Distance:78
Num_trans:15
All_trans:LC027945:78 LC027946:78 LC050979:78 LC050980:78 LC050981:78 LC050982:78 LC050983:78 LC050984:78 LC050985:78 LC050986:78 LC050987:78 LC050988:78 LC050989:78 LC050990:78 LC050991:78



TATA-Box annotation


Distance to TSS:-8502
Nearest PromoterID:NR_026816
Entrez ID:100130889
Nearest Unigene:Hs.670091
Nearest Refseq:NM_001134284
Nearest Ensembl:ENSG00000204528
Gene Name:psoriasis susceptibility 1 candidate 3 (non-protein coding)
Gene Alias:NCRNA00196
Gene Description:psoriasis susceptibility 1 candidate 3 (non-protein coding)
Gene Type:ncRNA
CpG%:0.035
GC%:0.467662
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):"-29(GACCTTAAAAGG,-,0.00),-27(CCTTAAAAGGGA,+,0.00)"