Difference between revisions of "TSS:Mm 146388.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000181931.2:-306 AK147472:-306 AK144971:319 |chr=chr18 |cpg_percent=0.225 |distance=-306 |distance_to_tss=124 |end=82692630 |entrez_id=329002 |...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |Gm335= | ||
|all_trans=ENSMUST00000181931.2:-306 AK147472:-306 AK144971:319 | |all_trans=ENSMUST00000181931.2:-306 AK147472:-306 AK144971:319 | ||
|chr=chr18 | |chr=chr18 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=124 | |distance_to_tss=124 | ||
|end=82692630 | |end=82692630 | ||
| + | |end_of_center_position=82692610 | ||
|entrez_id=329002 | |entrez_id=329002 | ||
|gc_percent=0.870647 | |gc_percent=0.870647 | ||
| − | |gene_alias=AI447957 | + | |gene_alias=AI447957 |
|gene_description=zinc finger protein 236 | |gene_description=zinc finger protein 236 | ||
|gene_id=100038564 | |gene_id=100038564 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=82692589 | |start=82692589 | ||
| + | |start_of_center_position=82692609 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENSMUST00000181931.2 AK147472 | |transcript_name=ENSMUST00000181931.2 AK147472 | ||
Revision as of 18:39, 14 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 82692609 |
|---|---|
| End of the center position in the TSS region: | 82692610 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENSMUST00000181931.2 AK147472 |
|---|---|
| Distance: | -306 |
| Num_trans: | 3 |
| All_trans: | ENSMUST00000181931.2:-306 AK147472:-306 AK144971:319 |
TATA-Box annotation
| Distance to TSS: | 124 |
|---|---|
| Nearest PromoterID: | NM_177832 |
| Entrez ID: | 329002 |
| Nearest Unigene: | Mm.34438 |
| Nearest Refseq: | NM_177832 |
| Nearest Ensembl: | ENSMUSG00000041258 |
| Gene Name: | predicted gene 10524 |
| Gene Alias: | AI447957 |
| Gene Description: | zinc finger protein 236 |
| Gene Type: | protein-coding |
| CpG%: | 0.225 |
| GC%: | 0.870647 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
