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Difference between revisions of "TSS:Hg 158961.1"

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(Created page with "{{TSSDetail |all_trans=NM_001145536:0 AK128415:0 AK309386:-76 ENST00000381365.3:-112 uc002fzl.4:-112 ENST00000521575.1:-230 uc010ckr.4:-230 AK308530:-230 |chr=chr17 |cpg_perce...")
 
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|distance_to_tss=2
 
|distance_to_tss=2
 
|end=4899663
 
|end=4899663
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|end_of_center_position=4899656
 
|entrez_id=100130311
 
|entrez_id=100130311
 
|gc_percent=0.626866
 
|gc_percent=0.626866
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|species=human
 
|species=human
 
|start=4899647
 
|start=4899647
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|start_of_center_position=4899655
 
|strand=+
 
|strand=+
 
|transcript_name=NM_001145536 AK128415
 
|transcript_name=NM_001145536 AK128415

Revision as of 22:58, 14 May 2019

Basic information about the TSS


TSS ID:hg_158961.1
Species:human
Chr:chr17
TSS Classification:yes
Start:4899647
End:4899663
Strand:+
TSS Score:1
Start of the center position in the TSS region:4899655
End of the center position in the TSS region:4899656



Gene and protein annotation


Transcript_name:NM_001145536 AK128415
Distance:0
GeneID:100130311
HGNC/MGI_ID:HGNC:37238
UniProt_ID:Q6ZR85
Gene_name:chromosome 17 open reading frame 107
Gene_symbol:C17orf107
Gene_synonyms:
Gene_source:HGNC:37238



Transcript annotation


Transcript_name:NM_001145536 AK128415
Distance:0
Num_trans:8
All_trans:NM_001145536:0 AK128415:0 AK309386:-76 ENST00000381365.3:-112 uc002fzl.4:-112 ENST00000521575.1:-230 uc010ckr.4:-230 AK308530:-230



TATA-Box annotation


Distance to TSS:2
Nearest PromoterID:NM_001145536
Entrez ID:100130311
Nearest Unigene:Hs.579243
Nearest Refseq:NM_001145536
Nearest Ensembl:ENSG00000205710
Gene Name:chromosome 17 open reading frame 107
Gene Alias:-
Gene Description:chromosome 17 open reading frame 107
Gene Type:protein-coding
CpG%:0.085
GC%:0.626866
TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation):