Difference between revisions of "TSS:Hg 82398.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000265846.9:12 uc003sjo.6:12 NM_006869:26 AB097049:78 AF082324:78 AJ006422:-203 BC033747:225 AB587419:229 KJ898337:231 |chr=chr7 |cpg_percent=0.17...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |GCS1L= | ||
|all_trans=ENST00000265846.9:12 uc003sjo.6:12 NM_006869:26 AB097049:78 AF082324:78 AJ006422:-203 BC033747:225 AB587419:229 KJ898337:231 | |all_trans=ENST00000265846.9:12 uc003sjo.6:12 NM_006869:26 AB097049:78 AF082324:78 AJ006422:-203 BC033747:225 AB587419:229 KJ898337:231 | ||
|chr=chr7 | |chr=chr7 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=-30 | |distance_to_tss=-30 | ||
|end=954717 | |end=954717 | ||
| + | |end_of_center_position=954713 | ||
|entrez_id=11033 | |entrez_id=11033 | ||
|gc_percent=0.835821 | |gc_percent=0.835821 | ||
| − | |gene_alias=CENTA1 | + | |gene_alias=CENTA1 |
|gene_description=ArfGAP with dual PH domains 1 | |gene_description=ArfGAP with dual PH domains 1 | ||
|gene_id=11033 | |gene_id=11033 | ||
| Line 22: | Line 24: | ||
|nearest_unigene=Hs.602573 | |nearest_unigene=Hs.602573 | ||
|num_trans=9 | |num_trans=9 | ||
| + | |p42IP4= | ||
|species=human | |species=human | ||
|start=954708 | |start=954708 | ||
| + | |start_of_center_position=954712 | ||
|strand=- | |strand=- | ||
|transcript_name=ENST00000265846.9 uc003sjo.6 | |transcript_name=ENST00000265846.9 uc003sjo.6 | ||
Revision as of 02:12, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 954712 |
|---|---|
| End of the center position in the TSS region: | 954713 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000265846.9 uc003sjo.6 |
|---|---|
| Distance: | 12 |
| Num_trans: | 9 |
| All_trans: | ENST00000265846.9:12 uc003sjo.6:12 NM_006869:26 AB097049:78 AF082324:78 AJ006422:-203 BC033747:225 AB587419:229 KJ898337:231 |
TATA-Box annotation
| Distance to TSS: | -30 |
|---|---|
| Nearest PromoterID: | NM_006869 |
| Entrez ID: | 11033 |
| Nearest Unigene: | Hs.602573 |
| Nearest Refseq: | NM_006869 |
| Nearest Ensembl: | ENSG00000105963 |
| Gene Name: | ArfGAP with dual PH domains 1 |
| Gene Alias: | CENTA1 |
| Gene Description: | ArfGAP with dual PH domains 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.175 |
| GC%: | 0.835821 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
