Difference between revisions of "TSS:Mm 19795.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENSMUST00000146110.1:0 NR_033473:0 uc012cav.1:0 AK145809:0 |chr=chr2 |cpg_percent=0.01 |distance=0 |distance_to_tss=8 |end=109913324 |entrez_id=10003845...") |
|||
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
| + | |OTTMUSG00000015136= | ||
|all_trans=ENSMUST00000146110.1:0 NR_033473:0 uc012cav.1:0 AK145809:0 | |all_trans=ENSMUST00000146110.1:0 NR_033473:0 uc012cav.1:0 AK145809:0 | ||
|chr=chr2 | |chr=chr2 | ||
| Line 6: | Line 7: | ||
|distance_to_tss=8 | |distance_to_tss=8 | ||
|end=109913324 | |end=109913324 | ||
| + | |end_of_center_position=109913311 | ||
|entrez_id=100038454 | |entrez_id=100038454 | ||
|gc_percent=0.378109 | |gc_percent=0.378109 | ||
| − | |gene_alias=Gm13939 | + | |gene_alias=Gm13939 |
|gene_description=pluripotency associated transcript 8 | |gene_description=pluripotency associated transcript 8 | ||
|gene_id=100038454 | |gene_id=100038454 | ||
| Line 24: | Line 26: | ||
|species=mouse | |species=mouse | ||
|start=109913297 | |start=109913297 | ||
| + | |start_of_center_position=109913310 | ||
|strand=- | |strand=- | ||
|transcript_name=ENSMUST00000146110.1 NR_033473 uc012cav.1 AK145809 | |transcript_name=ENSMUST00000146110.1 NR_033473 uc012cav.1 AK145809 | ||
Revision as of 06:59, 15 May 2019
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 109913310 |
|---|---|
| End of the center position in the TSS region: | 109913311 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENSMUST00000146110.1 NR_033473 uc012cav.1 AK145809 |
|---|---|
| Distance: | 0 |
| Num_trans: | 4 |
| All_trans: | ENSMUST00000146110.1:0 NR_033473:0 uc012cav.1:0 AK145809:0 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NR_033473 |
| Entrez ID: | 100038454 |
| Nearest Unigene: | Mm.365649 |
| Nearest Refseq: | NR_033473 |
| Nearest Ensembl: | ENSMUSG00000063751 |
| Gene Name: | pluripotency associated transcript 8 |
| Gene Alias: | Gm13939 |
| Gene Description: | pluripotency associated transcript 8 |
| Gene Type: | ncRNA |
| CpG%: | 0.01 |
| GC%: | 0.378109 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
