Difference between revisions of "TSS:Hg 169180.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000551557.1:36 uc060myb.1:36 ENST00000549253.5:-78 NM_001278682:-78 uc060mya.1:-78 ENST00000405385.7:150 NM_173209:150 NM_173208:150 NM_001278684:...") |
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000551557.1:36 uc060myb.1:36 ENST00000549253.5:-78 NM_001278682:-78 uc060mya.1:-78 ENST00000405385.7:150 NM_173209:150 NM_173208:150 NM_001278684:150 uc002klx.5:150 ENST00000343820.9:203 uc002kly.5:203 ENST00000407501.6:381 uc002klw.5:381 | |all_trans=ENST00000551557.1:36 uc060myb.1:36 ENST00000549253.5:-78 NM_001278682:-78 uc060mya.1:-78 ENST00000405385.7:150 NM_173209:150 NM_173208:150 NM_001278684:150 uc002klx.5:150 ENST00000343820.9:203 uc002kly.5:203 ENST00000407501.6:381 uc002klw.5:381 | ||
|chr=chr18 | |chr=chr18 | ||
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|distance_to_tss=83 | |distance_to_tss=83 | ||
|end=3449501 | |end=3449501 | ||
| + | |end_of_center_position=3449496 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.597015 | |gc_percent=0.597015 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3449490 | |start=3449490 | ||
| + | |start_of_center_position=3449495 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000551557.1 uc060myb.1 | |transcript_name=ENST00000551557.1 uc060myb.1 | ||
Revision as of 08:58, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3449495 |
|---|---|
| End of the center position in the TSS region: | 3449496 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000551557.1 uc060myb.1 |
|---|---|
| Distance: | 36 |
| Num_trans: | 14 |
| All_trans: | ENST00000551557.1:36 uc060myb.1:36 ENST00000549253.5:-78 NM_001278682:-78 uc060mya.1:-78 ENST00000405385.7:150 NM_173209:150 NM_173208:150 NM_001278684:150 uc002klx.5:150 ENST00000343820.9:203 uc002kly.5:203 ENST00000407501.6:381 uc002klw.5:381 |
TATA-Box annotation
| Distance to TSS: | 83 |
|---|---|
| Nearest PromoterID: | NM_001278682 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.075 |
| GC%: | 0.597015 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
