Difference between revisions of "TSS:Hg 169186.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
| + | |TGIF= | ||
|all_trans=ENST00000407501.6:20 uc002klw.5:20 ENST00000343820.9:-120 uc002kly.5:-120 ENST00000405385.7:-173 NM_173209:-173 NM_173208:-173 NM_001278684:-173 uc002klx.5:-173 ENST00000546979.5:174 uc060myc.1:174 ENST00000551557.1:-287 uc060myb.1:-287 NM_003244:310 ENST00000551402.1:315 uc010dkm.3:315 AK309471:315 X89750:329 ENST00000577543.5:350 uc060myd.1:350 ENST00000549253.5:-411 NM_001278682:-411 uc060mya.1:-411 | |all_trans=ENST00000407501.6:20 uc002klw.5:20 ENST00000343820.9:-120 uc002kly.5:-120 ENST00000405385.7:-173 NM_173209:-173 NM_173208:-173 NM_001278684:-173 uc002klx.5:-173 ENST00000546979.5:174 uc060myc.1:174 ENST00000551557.1:-287 uc060myb.1:-287 NM_003244:310 ENST00000551402.1:315 uc010dkm.3:315 AK309471:315 X89750:329 ENST00000577543.5:350 uc060myd.1:350 ENST00000549253.5:-411 NM_001278682:-411 uc060mya.1:-411 | ||
|chr=chr18 | |chr=chr18 | ||
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|distance_to_tss=192 | |distance_to_tss=192 | ||
|end=3449862 | |end=3449862 | ||
| + | |end_of_center_position=3449843 | ||
|entrez_id=7050 | |entrez_id=7050 | ||
|gc_percent=0.636816 | |gc_percent=0.636816 | ||
| − | |gene_alias=HPE4 | + | |gene_alias=HPE4 |
|gene_description=TGFB induced factor homeobox 1 | |gene_description=TGFB induced factor homeobox 1 | ||
|gene_id=7050 | |gene_id=7050 | ||
| Line 24: | Line 26: | ||
|species=human | |species=human | ||
|start=3449823 | |start=3449823 | ||
| + | |start_of_center_position=3449842 | ||
|strand=+ | |strand=+ | ||
|transcript_name=ENST00000407501.6 uc002klw.5 | |transcript_name=ENST00000407501.6 uc002klw.5 | ||
Revision as of 08:59, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 3449842 |
|---|---|
| End of the center position in the TSS region: | 3449843 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000407501.6 uc002klw.5 |
|---|---|
| Distance: | 20 |
| Num_trans: | 23 |
| All_trans: | ENST00000407501.6:20 uc002klw.5:20 ENST00000343820.9:-120 uc002kly.5:-120 ENST00000405385.7:-173 NM_173209:-173 NM_173208:-173 NM_001278684:-173 uc002klx.5:-173 ENST00000546979.5:174 uc060myc.1:174 ENST00000551557.1:-287 uc060myb.1:-287 NM_003244:310 ENST00000551402.1:315 uc010dkm.3:315 AK309471:315 X89750:329 ENST00000577543.5:350 uc060myd.1:350 ENST00000549253.5:-411 NM_001278682:-411 uc060mya.1:-411 |
TATA-Box annotation
| Distance to TSS: | 192 |
|---|---|
| Nearest PromoterID: | NM_173209 |
| Entrez ID: | 7050 |
| Nearest Unigene: | Hs.373550 |
| Nearest Refseq: | NM_003244 |
| Nearest Ensembl: | ENSG00000177426 |
| Gene Name: | TGFB induced factor homeobox 1 |
| Gene Alias: | HPE4 |
| Gene Description: | TGFB induced factor homeobox 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.07 |
| GC%: | 0.636816 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
