Difference between revisions of "TSS:Hg 170931.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000587254.5:0 ENST00000586421.1:0 NR_028340:0 NR_028339:0 uc060qmh.1:0 uc002lnx.3:0 ENST00000589574.1:73 uc010xfo.3:73 ENST00000588226.5:111 ENST0...") |
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|distance_to_tss=1 | |distance_to_tss=1 | ||
|end=80147938 | |end=80147938 | ||
| + | |end_of_center_position=80147925 | ||
|entrez_id=100130522 | |entrez_id=100130522 | ||
|gc_percent=0.512438 | |gc_percent=0.512438 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=80147911 | |start=80147911 | ||
| + | |start_of_center_position=80147924 | ||
|strand=+ | |strand=+ | ||
|tata_box="89(GGCTATAAATGT,-,0.00)" | |tata_box="89(GGCTATAAATGT,-,0.00)" | ||
Revision as of 12:19, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 80147924 |
|---|---|
| End of the center position in the TSS region: | 80147925 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000587254.5 ENST00000586421.1 NR_028340 NR_028339 uc060qmh.1 uc002lnx.3 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000587254.5:0 ENST00000586421.1:0 NR_028340:0 NR_028339:0 uc060qmh.1:0 uc002lnx.3:0 ENST00000589574.1:73 uc010xfo.3:73 ENST00000588226.5:111 ENST00000585422.1:111 uc060qmi.1:111 uc060qmj.1:111 AK056304:111 |
TATA-Box annotation
| Distance to TSS: | 1 |
|---|---|
| Nearest PromoterID: | NR_028340 |
| Entrez ID: | 100130522 |
| Nearest Unigene: | Hs.352602 |
| Nearest Refseq: | NM_001145731 |
| Nearest Ensembl: | ENSG00000267270 |
| Gene Name: | PARD6G antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | PARD6G antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.512438 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "89(GGCTATAAATGT,-,0.00)" |
