Difference between revisions of "TSS:Hg 170932.1"
From referenceTSS
(Created page with "{{TSSDetail |all_trans=ENST00000588226.5:0 ENST00000585422.1:0 uc060qmi.1:0 uc060qmj.1:0 AK056304:0 ENST00000589574.1:-30 uc010xfo.3:-30 ENST00000586421.1:-116 uc002lnx.3:-116...") |
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|distance_to_tss=124 | |distance_to_tss=124 | ||
|end=80148055 | |end=80148055 | ||
| + | |end_of_center_position=80148048 | ||
|entrez_id=100130522 | |entrez_id=100130522 | ||
|gc_percent=0.542289 | |gc_percent=0.542289 | ||
| Line 24: | Line 25: | ||
|species=human | |species=human | ||
|start=80148040 | |start=80148040 | ||
| + | |start_of_center_position=80148047 | ||
|strand=+ | |strand=+ | ||
|tata_box="-34(GGCTATAAATGT,-,0.00)" | |tata_box="-34(GGCTATAAATGT,-,0.00)" | ||
Revision as of 12:19, 15 May 2019
Basic information about the TSS
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| Start of the center position in the TSS region: | 80148047 |
|---|---|
| End of the center position in the TSS region: | 80148048 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000588226.5 ENST00000585422.1 uc060qmi.1 uc060qmj.1 AK056304 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000588226.5:0 ENST00000585422.1:0 uc060qmi.1:0 uc060qmj.1:0 AK056304:0 ENST00000589574.1:-30 uc010xfo.3:-30 ENST00000586421.1:-116 uc002lnx.3:-116 ENST00000587254.5:-117 NR_028340:-117 NR_028339:-117 uc060qmh.1:-117 |
TATA-Box annotation
| Distance to TSS: | 124 |
|---|---|
| Nearest PromoterID: | NR_028340 |
| Entrez ID: | 100130522 |
| Nearest Unigene: | Hs.352602 |
| Nearest Refseq: | NM_001145731 |
| Nearest Ensembl: | ENSG00000267270 |
| Gene Name: | PARD6G antisense RNA 1 |
| Gene Alias: | - |
| Gene Description: | PARD6G antisense RNA 1 |
| Gene Type: | ncRNA |
| CpG%: | 0.04 |
| GC%: | 0.542289 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): | "-34(GGCTATAAATGT,-,0.00)" |
