Difference between revisions of "TSS:Hg 10003.1"
From referenceTSS
| Line 5: | Line 5: | ||
|PCMT= | |PCMT= | ||
|PPMT= | |PPMT= | ||
| − | |all_trans= | + | |all_trans=BC028168:0 AB590586:1 AF064084:-3 KJ893378:4 KJ905434:4 CR541671:5 CR541711:5 AK092890:-20 ENST00000343813.10:-21 NM_012405:-21 ENST00000489498.5:-29 ENST00000474756.1:-29 BC017037:-29 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.16 | |cpg_percent=0.16 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=35 |
|end=6235943 | |end=6235943 | ||
|end_of_center_position=6235930 | |end_of_center_position=6235930 | ||
|entrez_id=23463 | |entrez_id=23463 | ||
|gc_percent=0.791045 | |gc_percent=0.791045 | ||
| − | |gene_alias=HSTE14 | + | |gene_alias=HSTE14|MST098|MSTP098|PCCMT|PCMT|PPMT |
|gene_description=isoprenylcysteine carboxyl methyltransferase | |gene_description=isoprenylcysteine carboxyl methyltransferase | ||
|gene_id=23463 | |gene_id=23463 | ||
| Line 27: | Line 27: | ||
|nearest_refseq=NM_012405 | |nearest_refseq=NM_012405 | ||
|nearest_unigene=Hs.515688 | |nearest_unigene=Hs.515688 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=6235915 | |start=6235915 | ||
|start_of_center_position=6235929 | |start_of_center_position=6235929 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=BC028168 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10003.1 | |tss_id=hg_10003.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 17:28, 11 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6235929 |
|---|---|
| End of the center position in the TSS region: | 6235930 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | BC028168 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | BC028168:0 AB590586:1 AF064084:-3 KJ893378:4 KJ905434:4 CR541671:5 CR541711:5 AK092890:-20 ENST00000343813.10:-21 NM_012405:-21 ENST00000489498.5:-29 ENST00000474756.1:-29 BC017037:-29 |
TATA-Box annotation
| Distance to TSS: | 35 |
|---|---|
| Nearest PromoterID: | NM_012405 |
| Entrez ID: | 23463 |
| Nearest Unigene: | Hs.515688 |
| Nearest Refseq: | NM_012405 |
| Nearest Ensembl: | ENSG00000116237 |
| Gene Name: | isoprenylcysteine carboxyl methyltransferase |
| Gene Alias: | HSTE14 |
| Gene Description: | isoprenylcysteine carboxyl methyltransferase |
| Gene Type: | protein-coding |
| CpG%: | 0.16 |
| GC%: | 0.791045 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
