Difference between revisions of "TSS:Hg 100036.1"
From referenceTSS
| Line 4: | Line 4: | ||
|DNZ1= | |DNZ1= | ||
|HSPC097= | |HSPC097= | ||
| − | |all_trans=ENST00000380916. | + | |all_trans=ENST00000380916.9:0 NM_001354125:0 NM_001354129:0 NM_001354123:0 NM_001354122:0 NM_001354121:0 NM_001354128:0 NM_001354124:0 NM_001354130:0 NM_001354120:0 NM_001354118:0 NM_001354127:0 NM_001354126:0 NR_148717:0 NR_148716:0 NR_148715:0 NR_148714:0 NM_001354119:0 NR_148718:0 NM_178566:0 BC042558:-32 LF355381:75 MA590958:75 AK292960:132 AF161360:137 ENST00000497966.1:155 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| − | |distance= | + | |distance=0 |
| − | |distance_to_tss= | + | |distance_to_tss=3 |
|end=14693439 | |end=14693439 | ||
|end_of_center_position=14693430 | |end_of_center_position=14693430 | ||
|entrez_id=340481 | |entrez_id=340481 | ||
|gc_percent=0.761194 | |gc_percent=0.761194 | ||
| − | |gene_alias= | + | |gene_alias=DHHC-21|DHHC21|DNZ1|HSPC097 |
|gene_description=zinc finger DHHC-type containing 21 | |gene_description=zinc finger DHHC-type containing 21 | ||
|gene_id=340481 | |gene_id=340481 | ||
| − | |gene_name=zinc finger DHHC-type | + | |gene_name=zinc finger DHHC-type palmitoyltransferase 21 |
|gene_source=HGNC:20750 | |gene_source=HGNC:20750 | ||
|gene_symbol=ZDHHC21 | |gene_symbol=ZDHHC21 | ||
| − | |gene_synonyms=DNZ1 HSPC097 | + | |gene_synonyms=DHHC21 DNZ1 HSPC097 |
|gene_type=protein-coding | |gene_type=protein-coding | ||
|hgnc_mgi_id=HGNC:20750 | |hgnc_mgi_id=HGNC:20750 | ||
|nearest_ensembl=ENSG00000175893 | |nearest_ensembl=ENSG00000175893 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_001354122 |
|nearest_refseq=NM_178566 | |nearest_refseq=NM_178566 | ||
|nearest_unigene=Hs.649522 | |nearest_unigene=Hs.649522 | ||
| − | |num_trans= | + | |num_trans=26 |
|species=human | |species=human | ||
|start=14693419 | |start=14693419 | ||
|start_of_center_position=14693429 | |start_of_center_position=14693429 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000380916. | + | |transcript_name=ENST00000380916.9 NM_001354125 NM_001354129 NM_001354123 NM_001354122 NM_001354121 NM_001354128 NM_001354124 NM_001354130 NM_001354120 NM_001354118 NM_001354127 NM_001354126 NR_148717 NR_148716 NR_148715 NR_148714 NM_001354119 NR_148718 NM_178566 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100036.1 | |tss_id=hg_100036.1 | ||
Revision as of 17:28, 11 June 2021
Basic information about the TSS
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|
| Start of the center position in the TSS region: | 14693429 |
|---|---|
| End of the center position in the TSS region: | 14693430 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000380916.9 NM_001354125 NM_001354129 NM_001354123 NM_001354122 NM_001354121 NM_001354128 NM_001354124 NM_001354130 NM_001354120 NM_001354118 NM_001354127 NM_001354126 NR_148717 NR_148716 NR_148715 NR_148714 NM_001354119 NR_148718 NM_178566 |
|---|---|
| Distance: | 0 |
| Num_trans: | 26 |
| All_trans: | ENST00000380916.9:0 NM_001354125:0 NM_001354129:0 NM_001354123:0 NM_001354122:0 NM_001354121:0 NM_001354128:0 NM_001354124:0 NM_001354130:0 NM_001354120:0 NM_001354118:0 NM_001354127:0 NM_001354126:0 NR_148717:0 NR_148716:0 NR_148715:0 NR_148714:0 NM_001354119:0 NR_148718:0 NM_178566:0 BC042558:-32 LF355381:75 MA590958:75 AK292960:132 AF161360:137 ENST00000497966.1:155 |
TATA-Box annotation
| Distance to TSS: | 3 |
|---|---|
| Nearest PromoterID: | NM_001354122 |
| Entrez ID: | 340481 |
| Nearest Unigene: | Hs.649522 |
| Nearest Refseq: | NM_178566 |
| Nearest Ensembl: | ENSG00000175893 |
| Gene Name: | zinc finger DHHC-type palmitoyltransferase 21 |
| Gene Alias: | DHHC-21 |
| Gene Description: | zinc finger DHHC-type containing 21 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.761194 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
