Difference between revisions of "TSS:Hg 100201.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|YEATS3= | |YEATS3= | ||
| − | |all_trans= | + | |all_trans=ENST00000380338.9:0 NM_004529:0 BX649194:0 BC036089:0 AK225957:2 L13744:29 ENST00000475957.1:40 BC030550:40 AK312914:45 KJ897192:219 CU690292:221 AB463323:223 KU178189:224 KU178190:224 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=-4 |
|end=20622526 | |end=20622526 | ||
|end_of_center_position=20622503 | |end_of_center_position=20622503 | ||
|entrez_id=4300 | |entrez_id=4300 | ||
|gc_percent=0.676617 | |gc_percent=0.676617 | ||
| − | |gene_alias=AF9 | + | |gene_alias=AF9|YEATS3 |
| − | |gene_description= | + | |gene_description=MLLT3 super elongation complex subunit |
|gene_id=4300 | |gene_id=4300 | ||
| − | |gene_name= | + | |gene_name=MLLT3 super elongation complex subunit |
|gene_source=HGNC:7136 | |gene_source=HGNC:7136 | ||
|gene_symbol=MLLT3 | |gene_symbol=MLLT3 | ||
| Line 23: | Line 23: | ||
|nearest_refseq=NM_004529 | |nearest_refseq=NM_004529 | ||
|nearest_unigene=Hs.317248 | |nearest_unigene=Hs.317248 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=20622479 | |start=20622479 | ||
|start_of_center_position=20622502 | |start_of_center_position=20622502 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=ENST00000380338.9 NM_004529 BX649194 BC036089 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100201.1 | |tss_id=hg_100201.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=A0A0S2Z448 P42568 Q6MZE2 |
}} | }} | ||
Revision as of 14:19, 14 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 20622502 |
|---|---|
| End of the center position in the TSS region: | 20622503 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380338.9 NM_004529 BX649194 BC036089 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000380338.9:0 NM_004529:0 BX649194:0 BC036089:0 AK225957:2 L13744:29 ENST00000475957.1:40 BC030550:40 AK312914:45 KJ897192:219 CU690292:221 AB463323:223 KU178189:224 KU178190:224 |
TATA-Box annotation
| Distance to TSS: | -4 |
|---|---|
| Nearest PromoterID: | NM_004529 |
| Entrez ID: | 4300 |
| Nearest Unigene: | Hs.317248 |
| Nearest Refseq: | NM_004529 |
| Nearest Ensembl: | ENSG00000171843 |
| Gene Name: | MLLT3 super elongation complex subunit |
| Gene Alias: | AF9 |
| Gene Description: | MLLT3 super elongation complex subunit |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.676617 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
