Difference between revisions of "TSS:Hg 100206.1"
From referenceTSS
| Line 3: | Line 3: | ||
|IFN-beta= | |IFN-beta= | ||
|IFNB= | |IFNB= | ||
| − | |all_trans=M28622:0 M25460:1 V00546:8 | + | |all_trans=ENST00000380232.4:0 NM_002176:0 M28622:0 M25460:1 V00546:8 M17373:-19 KJ891438:63 AB587428:71 V00547:72 BC096151:72 BC096153:72 BC069314:72 BC096152:72 BC096150:72 AB451323:72 AB451452:72 AB451491:135 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.015 | |cpg_percent=0.015 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=0 |
|end=21077944 | |end=21077944 | ||
|end_of_center_position=21077943 | |end_of_center_position=21077943 | ||
|entrez_id=3456 | |entrez_id=3456 | ||
|gc_percent=0.442786 | |gc_percent=0.442786 | ||
| − | |gene_alias=IFB | + | |gene_alias=IFB|IFF|IFN-beta|IFNB |
|gene_description=interferon beta 1 | |gene_description=interferon beta 1 | ||
|gene_id=3456 | |gene_id=3456 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_002176 | |nearest_refseq=NM_002176 | ||
|nearest_unigene=Hs.93177 | |nearest_unigene=Hs.93177 | ||
| − | |num_trans= | + | |num_trans=17 |
|species=human | |species=human | ||
|start=21077940 | |start=21077940 | ||
|start_of_center_position=21077942 | |start_of_center_position=21077942 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=M28622 | + | |transcript_name=ENST00000380232.4 NM_002176 M28622 |
|tss_classification=no | |tss_classification=no | ||
|tss_id=hg_100206.1 | |tss_id=hg_100206.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=P01574 |
}} | }} | ||
Revision as of 14:19, 14 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 21077942 |
|---|---|
| End of the center position in the TSS region: | 21077943 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000380232.4 NM_002176 M28622 |
|---|---|
| Distance: | 0 |
| Num_trans: | 17 |
| All_trans: | ENST00000380232.4:0 NM_002176:0 M28622:0 M25460:1 V00546:8 M17373:-19 KJ891438:63 AB587428:71 V00547:72 BC096151:72 BC096153:72 BC069314:72 BC096152:72 BC096150:72 AB451323:72 AB451452:72 AB451491:135 |
TATA-Box annotation
| Distance to TSS: | 0 |
|---|---|
| Nearest PromoterID: | NM_002176 |
| Entrez ID: | 3456 |
| Nearest Unigene: | Hs.93177 |
| Nearest Refseq: | NM_002176 |
| Nearest Ensembl: | ENSG00000171855 |
| Gene Name: | interferon beta 1 |
| Gene Alias: | IFB |
| Gene Description: | interferon beta 1 |
| Gene Type: | protein-coding |
| CpG%: | 0.015 |
| GC%: | 0.442786 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
