Difference between revisions of "TSS:Hg 100324.1"
From referenceTSS
| Line 2: | Line 2: | ||
|PLA2P= | |PLA2P= | ||
|PLAP= | |PLAP= | ||
| − | |all_trans= | + | |all_trans=NM_001321546:12 AL133608:22 AF145020:224 ENST00000397292.8:243 NM_001031689:243 ENST00000520884.5:252 AK002143:252 AK001642:312 AK022761:337 BC032551:344 AB385043:437 EU176453:438 EU176795:438 KJ898010:439 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.09 | |cpg_percent=0.09 | ||
| − | |distance= | + | |distance=12 |
|distance_to_tss=-17 | |distance_to_tss=-17 | ||
|end=26947495 | |end=26947495 | ||
| Line 11: | Line 11: | ||
|entrez_id=9373 | |entrez_id=9373 | ||
|gc_percent=0.606965 | |gc_percent=0.606965 | ||
| − | |gene_alias=DOA1 | + | |gene_alias=DOA1|NDMSBA|PLA2P|PLAP |
|gene_description=phospholipase A2 activating protein | |gene_description=phospholipase A2 activating protein | ||
|gene_id=9373 | |gene_id=9373 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_004253 | |nearest_refseq=NM_004253 | ||
|nearest_unigene=Hs.27182 | |nearest_unigene=Hs.27182 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=26947484 | |start=26947484 | ||
|start_of_center_position=26947489 | |start_of_center_position=26947489 | ||
|strand=- | |strand=- | ||
| − | |transcript_name= | + | |transcript_name=NM_001321546 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100324.1 | |tss_id=hg_100324.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id= |
}} | }} | ||
Revision as of 14:22, 14 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 26947489 |
|---|---|
| End of the center position in the TSS region: | 26947490 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | NM_001321546 |
|---|---|
| Distance: | 12 |
| Num_trans: | 14 |
| All_trans: | NM_001321546:12 AL133608:22 AF145020:224 ENST00000397292.8:243 NM_001031689:243 ENST00000520884.5:252 AK002143:252 AK001642:312 AK022761:337 BC032551:344 AB385043:437 EU176453:438 EU176795:438 KJ898010:439 |
TATA-Box annotation
| Distance to TSS: | -17 |
|---|---|
| Nearest PromoterID: | NM_001321546 |
| Entrez ID: | 9373 |
| Nearest Unigene: | Hs.27182 |
| Nearest Refseq: | NM_004253 |
| Nearest Ensembl: | ENSG00000137055 |
| Gene Name: | phospholipase A2 activating protein |
| Gene Alias: | DOA1 |
| Gene Description: | phospholipase A2 activating protein |
| Gene Type: | protein-coding |
| CpG%: | 0.09 |
| GC%: | 0.606965 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
