Difference between revisions of "TSS:Hg 100398.1"
From referenceTSS
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{{TSSDetail | {{TSSDetail | ||
|CI= | |CI= | ||
| − | |all_trans=ENST00000379847. | + | |all_trans=ENST00000379847.8:0 ENST00000350021.2:0 NM_002493:0 NM_182739:0 AK289702:0 BC016708:0 BC009801:0 AF067167:0 BC029247:4 AF035840:5 ENST00000366466.5:-15 NM_001199987:-15 KJ891678:72 CR456920:73 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.12 | |cpg_percent=0.12 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=8 |
|end=32573169 | |end=32573169 | ||
|end_of_center_position=32573151 | |end_of_center_position=32573151 | ||
|entrez_id=4712 | |entrez_id=4712 | ||
|gc_percent=0.621891 | |gc_percent=0.621891 | ||
| − | |gene_alias=B17 | + | |gene_alias=B17|CI |
|gene_description=NADH:ubiquinone oxidoreductase subunit B6 | |gene_description=NADH:ubiquinone oxidoreductase subunit B6 | ||
|gene_id=4712 | |gene_id=4712 | ||
| Line 20: | Line 20: | ||
|hgnc_mgi_id=HGNC:7701 | |hgnc_mgi_id=HGNC:7701 | ||
|nearest_ensembl=ENSG00000165264 | |nearest_ensembl=ENSG00000165264 | ||
| − | |nearest_promoter_id= | + | |nearest_promoter_id=NM_182739 |
|nearest_refseq=NM_002493 | |nearest_refseq=NM_002493 | ||
|nearest_unigene=Hs.493668 | |nearest_unigene=Hs.493668 | ||
| − | |num_trans= | + | |num_trans=14 |
|species=human | |species=human | ||
|start=32573132 | |start=32573132 | ||
|start_of_center_position=32573150 | |start_of_center_position=32573150 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000379847. | + | |transcript_name=ENST00000379847.8 ENST00000350021.2 NM_002493 NM_182739 AK289702 BC016708 BC009801 AF067167 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100398.1 | |tss_id=hg_100398.1 | ||
Revision as of 15:18, 15 June 2021
Basic information about the TSS
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| Start of the center position in the TSS region: | 32573150 |
|---|---|
| End of the center position in the TSS region: | 32573151 |
Gene and protein annotation
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Transcript annotation
| Transcript_name: | ENST00000379847.8 ENST00000350021.2 NM_002493 NM_182739 AK289702 BC016708 BC009801 AF067167 |
|---|---|
| Distance: | 0 |
| Num_trans: | 14 |
| All_trans: | ENST00000379847.8:0 ENST00000350021.2:0 NM_002493:0 NM_182739:0 AK289702:0 BC016708:0 BC009801:0 AF067167:0 BC029247:4 AF035840:5 ENST00000366466.5:-15 NM_001199987:-15 KJ891678:72 CR456920:73 |
TATA-Box annotation
| Distance to TSS: | 8 |
|---|---|
| Nearest PromoterID: | NM_182739 |
| Entrez ID: | 4712 |
| Nearest Unigene: | Hs.493668 |
| Nearest Refseq: | NM_002493 |
| Nearest Ensembl: | ENSG00000165264 |
| Gene Name: | NADH:ubiquinone oxidoreductase subunit B6 |
| Gene Alias: | B17 |
| Gene Description: | NADH:ubiquinone oxidoreductase subunit B6 |
| Gene Type: | protein-coding |
| CpG%: | 0.12 |
| GC%: | 0.621891 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
