Difference between revisions of "TSS:Hg 10042.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Syx= | |Syx= | ||
|Tech= | |Tech= | ||
| − | |all_trans=ENST00000535355. | + | |all_trans=ENST00000674790.1:0 ENST00000535355.6:0 NM_001265593:0 AK299523:0 ENST00000675694.1:-407 ENST00000676287.1:-464 ENST00000674803.1:-464 ENST00000400913.6:-466 ENST00000675655.1:-466 NM_001042665:-466 AB097001:-466 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.14 | |cpg_percent=0.14 | ||
| Line 13: | Line 13: | ||
|entrez_id=57449 | |entrez_id=57449 | ||
|gc_percent=0.80597 | |gc_percent=0.80597 | ||
| − | |gene_alias=CMTRIC | + | |gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech |
|gene_description=pleckstrin homology and RhoGEF domain containing G5 | |gene_description=pleckstrin homology and RhoGEF domain containing G5 | ||
|gene_id=57449 | |gene_id=57449 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_020631 | |nearest_refseq=NM_020631 | ||
|nearest_unigene=Hs.284232 | |nearest_unigene=Hs.284232 | ||
| − | |num_trans= | + | |num_trans=11 |
|species=human | |species=human | ||
|start=6485442 | |start=6485442 | ||
|start_of_center_position=6485465 | |start_of_center_position=6485465 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000535355. | + | |transcript_name=ENST00000674790.1 ENST00000535355.6 NM_001265593 AK299523 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10042.1 | |tss_id=hg_10042.1 | ||
Revision as of 15:19, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6485465 |
|---|---|
| End of the center position in the TSS region: | 6485466 |
Gene and protein annotation
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|
Transcript annotation
| Transcript_name: | ENST00000674790.1 ENST00000535355.6 NM_001265593 AK299523 |
|---|---|
| Distance: | 0 |
| Num_trans: | 11 |
| All_trans: | ENST00000674790.1:0 ENST00000535355.6:0 NM_001265593:0 AK299523:0 ENST00000675694.1:-407 ENST00000676287.1:-464 ENST00000674803.1:-464 ENST00000400913.6:-466 ENST00000675655.1:-466 NM_001042665:-466 AB097001:-466 |
TATA-Box annotation
| Distance to TSS: | 4 |
|---|---|
| Nearest PromoterID: | NM_001265593 |
| Entrez ID: | 57449 |
| Nearest Unigene: | Hs.284232 |
| Nearest Refseq: | NM_020631 |
| Nearest Ensembl: | ENSG00000171680 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | CMTRIC |
| Gene Description: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Type: | protein-coding |
| CpG%: | 0.14 |
| GC%: | 0.80597 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
