Difference between revisions of "TSS:Hg 10046.1"
From referenceTSS
| Line 4: | Line 4: | ||
|Syx= | |Syx= | ||
|Tech= | |Tech= | ||
| − | |all_trans=ENST00000377725.5 | + | |all_trans=ENST00000377725.5:-23 BC015231:-23 ENST00000676362.1:-33 NM_001042664:-33 NM_001265594:-33 ENST00000340850.10:-47 |
|chr=chr1 | |chr=chr1 | ||
|cpg_percent=0.105 | |cpg_percent=0.105 | ||
| Line 13: | Line 13: | ||
|entrez_id=57449 | |entrez_id=57449 | ||
|gc_percent=0.691542 | |gc_percent=0.691542 | ||
| − | |gene_alias=CMTRIC | + | |gene_alias=CMTRIC|DSMA4|GEF720|Syx|Tech |
|gene_description=pleckstrin homology and RhoGEF domain containing G5 | |gene_description=pleckstrin homology and RhoGEF domain containing G5 | ||
|gene_id=57449 | |gene_id=57449 | ||
| Line 26: | Line 26: | ||
|nearest_refseq=NM_020631 | |nearest_refseq=NM_020631 | ||
|nearest_unigene=Hs.284232 | |nearest_unigene=Hs.284232 | ||
| − | |num_trans= | + | |num_trans=6 |
|species=human | |species=human | ||
|start=6490528 | |start=6490528 | ||
|start_of_center_position=6490537 | |start_of_center_position=6490537 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000377725.5 | + | |transcript_name=ENST00000377725.5 BC015231 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_10046.1 | |tss_id=hg_10046.1 | ||
Revision as of 15:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 6490537 |
|---|---|
| End of the center position in the TSS region: | 6490538 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000377725.5 BC015231 |
|---|---|
| Distance: | -23 |
| Num_trans: | 6 |
| All_trans: | ENST00000377725.5:-23 BC015231:-23 ENST00000676362.1:-33 NM_001042664:-33 NM_001265594:-33 ENST00000340850.10:-47 |
TATA-Box annotation
| Distance to TSS: | 42 |
|---|---|
| Nearest PromoterID: | NM_001042664 |
| Entrez ID: | 57449 |
| Nearest Unigene: | Hs.284232 |
| Nearest Refseq: | NM_020631 |
| Nearest Ensembl: | ENSG00000171680 |
| Gene Name: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Alias: | CMTRIC |
| Gene Description: | pleckstrin homology and RhoGEF domain containing G5 |
| Gene Type: | protein-coding |
| CpG%: | 0.105 |
| GC%: | 0.691542 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
