Difference between revisions of "TSS:Hg 100475.1"
From referenceTSS
| Line 1: | Line 1: | ||
{{TSSDetail | {{TSSDetail | ||
|UTP22= | |UTP22= | ||
| − | |all_trans=ENST00000464829.5:0 | + | |all_trans=ENST00000297990.9:0 ENST00000464829.5:0 NM_022917:0 AK026258:0 AK293969:0 BC020450:0 ENST00000353159.6:-1 ENST00000379471.3:-1 AF361081:11 AF361080:11 AF361079:12 NM_139235:-14 BC030139:29 |
|bA311H10.1= | |bA311H10.1= | ||
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.05 | |cpg_percent=0.05 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=17 |
|end=33473929 | |end=33473929 | ||
|end_of_center_position=33473907 | |end_of_center_position=33473907 | ||
|entrez_id=65083 | |entrez_id=65083 | ||
|gc_percent=0.587065 | |gc_percent=0.587065 | ||
| − | |gene_alias=NRAP | + | |gene_alias=NRAP|UTP22|bA311H10.1 |
|gene_description=nucleolar protein 6 | |gene_description=nucleolar protein 6 | ||
|gene_id=65083 | |gene_id=65083 | ||
| Line 24: | Line 24: | ||
|nearest_refseq=NM_022917 | |nearest_refseq=NM_022917 | ||
|nearest_unigene=Hs.493709 | |nearest_unigene=Hs.493709 | ||
| − | |num_trans= | + | |num_trans=13 |
|species=human | |species=human | ||
|start=33473884 | |start=33473884 | ||
|start_of_center_position=33473906 | |start_of_center_position=33473906 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=ENST00000464829.5 | + | |transcript_name=ENST00000297990.9 ENST00000464829.5 NM_022917 AK026258 AK293969 BC020450 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100475.1 | |tss_id=hg_100475.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id=B4DF80 | + | |uniprot_id=B4DF80 Q9H6R4 |
}} | }} | ||
Revision as of 15:20, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 33473906 |
|---|---|
| End of the center position in the TSS region: | 33473907 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000297990.9 ENST00000464829.5 NM_022917 AK026258 AK293969 BC020450 |
|---|---|
| Distance: | 0 |
| Num_trans: | 13 |
| All_trans: | ENST00000297990.9:0 ENST00000464829.5:0 NM_022917:0 AK026258:0 AK293969:0 BC020450:0 ENST00000353159.6:-1 ENST00000379471.3:-1 AF361081:11 AF361080:11 AF361079:12 NM_139235:-14 BC030139:29 |
TATA-Box annotation
| Distance to TSS: | 17 |
|---|---|
| Nearest PromoterID: | NM_022917 |
| Entrez ID: | 65083 |
| Nearest Unigene: | Hs.493709 |
| Nearest Refseq: | NM_022917 |
| Nearest Ensembl: | ENSG00000165271 |
| Gene Name: | nucleolar protein 6 |
| Gene Alias: | NRAP |
| Gene Description: | nucleolar protein 6 |
| Gene Type: | protein-coding |
| CpG%: | 0.05 |
| GC%: | 0.587065 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
