Difference between revisions of "TSS:Hg 100491.1"
From referenceTSS
| Line 3: | Line 3: | ||
|TCC52= | |TCC52= | ||
|WDR40A= | |WDR40A= | ||
| − | |all_trans=BC063823:0 AB067479:0 DQ518909:0 | + | |all_trans=ENST00000361264.9:0 NM_015397:0 BC063823:0 AB067479:0 DQ518909:0 AK292935:83 AK000354:110 KJ898559:227 AB384317:231 |
|chr=chr9 | |chr=chr9 | ||
|cpg_percent=0.11 | |cpg_percent=0.11 | ||
|distance=0 | |distance=0 | ||
| − | |distance_to_tss= | + | |distance_to_tss=9 |
|end=34126717 | |end=34126717 | ||
|end_of_center_position=34126690 | |end_of_center_position=34126690 | ||
|entrez_id=25853 | |entrez_id=25853 | ||
|gc_percent=0.626866 | |gc_percent=0.626866 | ||
| − | |gene_alias=CT102 | + | |gene_alias=CT102|KIAA1892|TCC52|WDR40A |
|gene_description=DDB1 and CUL4 associated factor 12 | |gene_description=DDB1 and CUL4 associated factor 12 | ||
|gene_id=25853 | |gene_id=25853 | ||
| Line 25: | Line 25: | ||
|nearest_refseq=NM_015397 | |nearest_refseq=NM_015397 | ||
|nearest_unigene=Hs.493750 | |nearest_unigene=Hs.493750 | ||
| − | |num_trans= | + | |num_trans=9 |
|species=human | |species=human | ||
|start=34126661 | |start=34126661 | ||
|start_of_center_position=34126689 | |start_of_center_position=34126689 | ||
|strand=- | |strand=- | ||
| − | |transcript_name=BC063823 AB067479 DQ518909 | + | |transcript_name=ENST00000361264.9 NM_015397 BC063823 AB067479 DQ518909 |
|tss_classification=yes | |tss_classification=yes | ||
|tss_id=hg_100491.1 | |tss_id=hg_100491.1 | ||
|tss_score=1 | |tss_score=1 | ||
| − | |uniprot_id= | + | |uniprot_id=Q5T6F0 |
}} | }} | ||
Revision as of 15:21, 15 June 2021
Basic information about the TSS
|
|
| Start of the center position in the TSS region: | 34126689 |
|---|---|
| End of the center position in the TSS region: | 34126690 |
Gene and protein annotation
|
|
Transcript annotation
| Transcript_name: | ENST00000361264.9 NM_015397 BC063823 AB067479 DQ518909 |
|---|---|
| Distance: | 0 |
| Num_trans: | 9 |
| All_trans: | ENST00000361264.9:0 NM_015397:0 BC063823:0 AB067479:0 DQ518909:0 AK292935:83 AK000354:110 KJ898559:227 AB384317:231 |
TATA-Box annotation
| Distance to TSS: | 9 |
|---|---|
| Nearest PromoterID: | NM_015397 |
| Entrez ID: | 25853 |
| Nearest Unigene: | Hs.493750 |
| Nearest Refseq: | NM_015397 |
| Nearest Ensembl: | ENSG00000198876 |
| Gene Name: | DDB1 and CUL4 associated factor 12 |
| Gene Alias: | CT102 |
| Gene Description: | DDB1 and CUL4 associated factor 12 |
| Gene Type: | protein-coding |
| CpG%: | 0.11 |
| GC%: | 0.626866 |
| TATA-Box(TBP)/Promoter/Homer Distance From TSS(sequence,strand,conservation): |
